RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 MARCH9Q86YJ5 346 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 HORMAD2Q8N7B1 307 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 FBXO22Q8NEZ5 403 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 NEIL3Q8TAT5 605 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 OTULINQ96BN8 352 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 GPR137Q96N19 417 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 ACAT2Q9BWD1 397 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 PIGUQ9H490 435 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 FOLH1BQ9HBA9 442 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 GPR52Q9Y2T5 361 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 TMEM129A0AVI4 362 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 CIB4A0PJX0 185 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 PRR23AA6NEV1 266 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 GTPBP1O00178 669 aaKnown RBP16.93■□□□□ 0.3
PRKCB-202ENST00000321728 SOD1P00441 154 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 TP53P04637 393 aaPredicted RBP16.93■□□□□ 0.3
PRKCB-202ENST00000321728 CKBP12277 381 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 ZNF250P15622 560 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 RPL3P39023 403 aaKnown RBP16.93■□□□□ 0.3
PRKCB-202ENST00000321728 SLC11A1P49279 550 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 CRHR2Q13324 411 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 PDE7AQ13946 482 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 INSL4Q14641 139 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 POU4F3Q15319 338 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 DTX3Q8N9I9 347 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 OR4D11Q8NGI4 311 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 BCL7CQ8WUZ0 217 aaPredicted RBP16.93■□□□□ 0.3
PRKCB-202ENST00000321728 MSANTD3Q96H12 275 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 LYSMD1Q96S90 227 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 RSPO3Q9BXY4 272 aaPredicted RBP16.93■□□□□ 0.3
PRKCB-202ENST00000321728 SLC6A16Q9GZN6 736 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 CXorf36Q9H7Y0 433 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 ADAM30Q9UKF2 790 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 ACP2P11117 423 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 TAGLNQ01995 201 aaKnown RBP16.93■□□□□ 0.3
PRKCB-202ENST00000321728 PLD1Q13393 1074 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 GPR176Q14439 515 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 ZNF267Q14586 743 aaPredicted RBP16.93■□□□□ 0.3
PRKCB-202ENST00000321728 PODNL1Q6PEZ8 512 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 C17orf99Q6UX52 265 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 GHDCQ8N2G8 530 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 PCNPQ8WW12 178 aaKnown RBP16.93■□□□□ 0.3
PRKCB-202ENST00000321728 PDXPQ96GD0 296 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 C17orf62Q9BQA9 187 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 C12orf10Q9HB07 376 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 MARCH5Q9NX47 278 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 TAS2R7Q9NYW3 318 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 EXTL2Q9UBQ6 330 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 PHF11Q9UIL8 331 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 TRAV6A0A075B6T7 132 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 TRDV1A0A1B0GX56 115 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 OR5K3A6NET4 321 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 SGTAO43765 313 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 AKAP8O43823 692 aaKnown RBP16.93■□□□□ 0.3
PRKCB-202ENST00000321728 ADAMTS4O75173 837 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 IL3P08700 152 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 UQCRC2P22695 453 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 IMPA1P29218 277 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 FLT3LGP49771 235 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 ATP12AP54707 1039 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 RAB40BQ12829 278 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 CST9Q5W186 159 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 FAM71E1Q6IPT2 247 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 B3GLCTQ6Y288 498 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 SLCO4C1Q6ZQN7 724 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 OR2AP1Q8NGE2 309 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 SCAMP4Q969E2 229 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 ZSCAN5AQ9BUG6 496 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 LINC00597Q9H2U6 94 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 EVA1BQ9NVM1 165 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 UCKL1Q9NWZ5 548 aa16.93■□□□□ 0.3
PRKCB-202ENST00000321728 C2orf92A0A1B0GVN3 265 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 QSOX1O00391 747 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 ZNF821O75541 412 aaPredicted RBP16.92■□□□□ 0.3
PRKCB-202ENST00000321728 PAHP00439 452 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 CATP04040 527 aaKnown RBP16.92■□□□□ 0.3
PRKCB-202ENST00000321728 EPHX1P07099 455 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 OR12D1P0DN82 309 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 CELP19835 753 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 ENPP1P22413 925 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 MMP11P24347 488 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 PTBP1P26599 531 aaKnown RBP eCLIP16.92■□□□□ 0.32e-7■■■■■ 42.7
PRKCB-202ENST00000321728 MTNR1AP48039 350 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 LSM11P83369 360 aaKnown RBP eCLIP16.92■□□□□ 0.34e-8■■■■■ 27.9
PRKCB-202ENST00000321728 MEF2AQ02078 507 aaPredicted RBP16.92■□□□□ 0.3
PRKCB-202ENST00000321728 SLBPQ14493 270 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRKCB-202ENST00000321728 CCNJQ5T5M9 372 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 MEX3DQ86XN8 651 aaKnown RBP16.92■□□□□ 0.3
PRKCB-202ENST00000321728 LILRA3Q8N6C8 439 aaPredicted RBP16.92■□□□□ 0.3
PRKCB-202ENST00000321728 LMNTD1Q8N9Z9 388 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 SLC22A12Q96S37 553 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 SEC14L3Q9UDX4 400 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 FBXW2Q9UKT8 454 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 SHISA3A0PJX4 238 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 H7C4K7 107 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 LALBAP00709 142 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 SPINT3P49223 89 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 SMIM11AP58511 58 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 TRILQ7L0X0 811 aa16.92■□□□□ 0.3
PRKCB-202ENST00000321728 ZER1Q7Z7L7 766 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms