RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 C17orf64Q86WR6 236 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 OR2L2Q8NH16 312 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 TTC9Q92623 222 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 RAD51AP1Q96B01 352 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 RPP25Q9BUL9 199 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 C3orf14Q9HBI5 128 aa14.74□□□□□ -0.05
SHROOM1-201ENST00000319854 TRBV23OR9-2A0A075B6M9 112 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 TNFRSF11BO00300 401 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 OR1F1O43749 312 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 MXD1Q05195 221 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 KRT33BQ14525 404 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 BTBD16Q32M84 506 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 PXDC1Q5TGL8 231 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 FCRL1Q96LA6 429 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 MAGEB10Q96LZ2 347 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 FRMD6Q96NE9 622 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 TMEM245Q9H330 911 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 WBP1LQ9NX94 342 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 SLC27A6Q9Y2P4 619 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 PCDHGA2Q9Y5H1 932 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 PLA2G10O15496 165 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 KAT7O95251 611 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 ALPPP05187 535 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 GZMKP49863 264 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 LBX1P52954 281 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 MAPK12P53778 367 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 HDDC3Q8N4P3 179 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 AMER3Q8N944 861 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 ANKRD53Q8N9V6 530 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 FERD3LQ96RJ6 166 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 SGPP1Q9BX95 441 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 PLA2G2FQ9BZM2 168 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 TEKT2Q9UIF3 430 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 HCN2Q9UL51 889 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 SNX7Q9UNH6 387 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 HOXB3P14651 431 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 ACADLP28330 430 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 GJA4P35212 333 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 PSPHP78330 225 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 SPDYE7PQ495Y7 208 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 GCNT6Q5T4J0 391 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 VWA5B2Q8N398 1253 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 OR4M2Q8NGB6 313 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 DOHHQ9BU89 302 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 SLC22A4Q9H015 551 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 OR52A5Q9H2C5 316 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 RNF121Q9H920 327 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 HHATLQ9HCP6 504 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 NDUFAF4Q9P032 175 aa14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 ZNF282Q9UDV7 671 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-201ENST00000319854 PLXNA2O75051 1894 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 SCN3AQ9NY46 2000 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 CXorf51AA0A1B0GTR3 108 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 TMEM229AB2RXF0 380 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 C1QTNF3-AMACRE9PGA6 284 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 PLPP1O14494 284 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 PI15O43692 258 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 KLHL18O94889 574 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 CKMT1AP12532 417 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 HSD3B1P14060 373 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 HSD3B2P26439 372 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 PRKAG1P54619 331 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 MANFP55145 182 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 POU6F2P78424 691 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 CDK3Q00526 305 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 FAM205BPQ63HN1 556 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 RD3Q7Z3Z2 195 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 CAMKK1Q8N5S9 505 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 TMIEQ8NEW7 156 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 C12orf66Q96MD2 445 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 OPALINQ96PE5 141 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 FAM83CQ9BQN1 747 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 ABCB9Q9NP78 766 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 BTNL2Q9UIR0 455 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 HEATR5BQ9P2D3 2071 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 SMIM30A4D0T7 59 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 B8ZZF3 427 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 SLC31A1O15431 190 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 TPST2O60704 377 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 SLC35G4P0C7Q5 338 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 M6PRP20645 277 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 ERP29P30040 261 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 MLLT3P42568 568 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 MVDP53602 400 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 CDK6Q00534 326 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 SCN1BQ07699 218 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 TJAP1Q5JTD0 557 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 FAM131AQ6UXB0 335 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 IDO2Q6ZQW0 420 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 YAF2Q8IY57 180 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 OMA1Q96E52 524 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 YIPF4Q9BSR8 244 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 TAPBPLQ9BX59 468 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 MIXL1Q9H2W2 232 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 SLAMF7Q9NQ25 335 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 TAAR2Q9P1P5 351 aa14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 SLC23A1Q9UHI7 598 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms