RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 RNFT2Q96EX2 444 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 UROC1Q96N76 676 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF582Q96NG8 517 aaPredicted RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ZDHHC3Q9NYG2 299 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ELF5Q9UKW6 265 aaPredicted RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 EEF1E1O43324 174 aaKnown RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 TRIM3O75382 744 aaPredicted RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 VNN2O95498 520 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 NTN1O95631 604 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 SLC16A8O95907 504 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 KLK1P06870 262 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 EPHA5P54756 1037 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 VSX2P58304 361 aaPredicted RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 DSTNP60981 165 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 TLE2Q04725 743 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 CRHR2Q13324 411 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 CRB2Q5IJ48 1285 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 CLLU1OSQ5K130 101 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ADGRF1Q5T601 910 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 AGTRAPQ6RW13 159 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ADGRD2Q7Z7M1 963 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 BMPERQ8N8U9 685 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 GPR32P1Q8NGA4 272 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 TMEM163Q8TC26 289 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 SCAMP4Q969E2 229 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 REEP4Q9H6H4 257 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 EGLN3Q9H6Z9 239 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 C12orf10Q9HB07 376 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ZFP64Q9NPA5 681 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ZC4H2Q9NQZ6 224 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 IL20RAQ9UHF4 553 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ATP6V1HQ9UI12 483 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 DIMT1Q9UNQ2 313 aaKnown RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 PCDHGB7Q9Y5F8 929 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 DSPPQ9NZW4 1301 aa9.15□□□□□ -0.95
PTPRA-202ENST00000318266 TEX51A0A1B0GUA7 166 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 A0A1W2PRB8 838 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ARHGEF33A8MVX0 844 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 CFDP00746 253 aaPredicted RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 RAF1P04049 648 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 PTGER1P34995 402 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 EEF1A2Q05639 463 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 GALEQ14376 348 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 MFSD13AQ14CX5 517 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ZSWIM7Q19AV6 140 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ZNF630Q2M218 657 aaPredicted RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 C12orf73Q69YU5 71 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 CRTC1Q6UUV9 634 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 QSOX2Q6ZRP7 698 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 IQCHQ86VS3 1027 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 OR4F15Q8NGB8 312 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 KIAA1143Q96AT1 154 aaPredicted RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 MS4A3Q96HJ5 214 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 FCRL1Q96LA6 429 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 GPA33Q99795 319 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 PRR14Q9BWN1 585 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 SPNS1Q9H2V7 528 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 PPIEQ9UNP9 301 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 MRPS7Q9Y2R9 242 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 TDRD15B5MCY1 1934 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 TMEM265A0A087WTH1 108 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 SEPT4O43236 478 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 EPHX1P07099 455 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 CBSLP0DN79 551 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 CBSP35520 551 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ATP6V1E1P36543 226 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 CRYZQ08257 329 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ZNF763Q0D2J5 394 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 COL9A2Q14055 689 aaPredicted RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ANGPT1Q15389 498 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 AANATQ16613 207 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 GPR33Q49SQ1 333 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 LIPJQ5W064 366 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 RAET1GQ6H3X3 334 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 KIAA1841Q6NSI8 718 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 KIAA1161Q6NSJ0 714 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 TMEM91Q6ZNR0 172 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 KCTD20Q7Z5Y7 419 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 DDX53Q86TM3 631 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 C2orf73Q8N5S3 287 aaPredicted RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 HORMAD2Q8N7B1 307 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ZBTB44Q8NCP5 570 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 SLC38A5Q8WUX1 472 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 CLP1Q92989 425 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 NEIL2Q969S2 332 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ZC3HAV1LQ96H79 300 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 TMEM19Q96HH6 336 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 PLA2G12AQ9BZM1 189 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 CLEC4MQ9H2X3 399 aaPredicted RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 PIGUQ9H490 435 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 MIEF1Q9NQG6 463 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ENAMQ9NRM1 1142 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 RDH8Q9NYR8 311 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 NKIRAS2Q9NYR9 191 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 GULP1Q9UBP9 304 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ZFR2Q9UPR6 939 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 SF3B6Q9Y3B4 125 aaKnown RBP9.14□□□□□ -0.95
PTPRA-202ENST00000318266 ALPK3Q96L96 1907 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 LINC00862A6NCI5 91 aa9.14□□□□□ -0.95
PTPRA-202ENST00000318266 OR5K3A6NET4 321 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms