RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ATP6V1C2Q8NEY4 427 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 STK35Q8TDR2 534 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 RXFP4Q8TDU9 374 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 TWIST2Q8WVJ9 160 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 DNASE1L2Q92874 299 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 HBEGFQ99075 208 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 MGME1Q9BQP7 344 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 TINF2Q9BSI4 451 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 ABHD16BQ9H3Z7 469 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CWH43Q9H720 699 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 FBRSL1Q9HCM7 1045 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 RASSF1Q9NS23 344 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 RUVBL1Q9Y265 456 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 TP53TG5Q9Y2B4 290 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 OBSL1O75147 1896 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 POLR2AP24928 1970 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 BTBD17A6NE02 478 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 ANXA2P2A6NMY6 339 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 FAM72CH0Y354 149 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 PTGESO14684 152 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 TOX3O15405 576 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 SMAD6O43541 496 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 SLC34A2O95436 690 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 SERPINA1P01009 418 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 HMBSP08397 361 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 ANXA8P13928 327 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CALCRP30988 508 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 LCN1P31025 176 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CCR7P32248 378 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 GCGRP47871 477 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CSNK1DP48730 415 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 OSTNP61366 133 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 EIF4HQ15056 248 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CDNFQ49AH0 187 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 FAM72AQ5TYM5 149 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 ANXA8L1Q5VT79 327 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 FAM72DQ6L9T8 149 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 NAA40Q86UY6 237 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 ATCAYQ86WG3 371 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 FAM72BQ86X60 149 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 FAM131BQ86XD5 332 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 ADHFE1Q8IWW8 467 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 SKA3Q8IX90 412 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 Q8N402 240 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 DNAJC22Q8N4W6 341 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 EFHBQ8N7U6 833 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 POMGNT2Q8NAT1 580 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 PCSK9Q8NBP7 692 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 TMEM145Q8NBT3 493 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 PLA2G15Q8NCC3 412 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 OR6X1Q8NH79 312 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 STAG3L4Q8TBR4 150 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 KCNJ9Q92806 393 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 SCMH1Q96GD3 660 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 TMEM74Q96NL1 305 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CNPPD1Q9BV87 410 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 PRR14Q9BWN1 585 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 DLL4Q9NR61 685 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 DUSP22Q9NRW4 184 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 SNTG1Q9NSN8 517 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 DHCR7Q9UBM7 475 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 METTL1Q9UBP6 276 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 OR12D3Q9UGF7 316 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 MRTO4Q9UKD2 239 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 PCTPQ9UKL6 214 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 GAB2Q9UQC2 676 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF451Q9Y4E5 1061 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 PCDHB7Q9Y5E2 793 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 MEIKINA0A087WXM9 373 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 A0A0U1RQF3 1178 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 OR6C75A6NL08 312 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 C9JVG2 144 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 H3BRB1 525 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 OIP5O43482 229 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 SIX6O95475 246 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 HLA-DQB2P05538 268 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 CCR1P32246 355 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 GLRBP48167 497 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 CCR9P51686 369 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 AGFG1P52594 562 aaKnown RBP6.31□□□□□ -1.4
ZNF540-201ENST00000316433 EPHA4P54764 986 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 RAB2AP61019 212 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 FKBP1BP68106 108 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 POU4F2Q12837 409 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 LYPLAL1Q5VWZ2 237 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 SYPL2Q5VXT5 272 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 MRNIPQ6NTE8 343 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 RPL13AP3Q6NVV1 102 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 ZC3H14Q6PJT7 736 aaKnown RBP6.31□□□□□ -1.4
ZNF540-201ENST00000316433 ALKAL2Q6UX46 152 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 CYP4Z1Q86W10 505 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 NUDT13Q86X67 352 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 FAM217AQ8IXS0 508 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 STK40Q8N2I9 435 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 DNAJC5GQ8N7S2 189 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 OR2L5Q8NG80 312 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 MISP3Q96FF7 219 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 TEFMQ96QE5 360 aaKnown RBP6.31□□□□□ -1.4
ZNF540-201ENST00000316433 APOL2Q9BQE5 337 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 TMEM43Q9BTV4 400 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms