RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 KIAA1324Q6UXG2 1013 aaKnown RBP10.9□□□□□ -0.66
PTPN2-201ENST00000309660 OR2L3Q8NG85 312 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 CREB3L4Q8TEY5 395 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 BTBD1Q9H0C5 482 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 DDX31Q9H8H2 851 aaKnown RBP10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SYNPO2LQ9H987 977 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 CLEC2DQ9UHP7 191 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 ENOPH1Q9UHY7 261 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SLC9A8Q9Y2E8 581 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 CLDN24A6NM45 220 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 RGS5O15539 181 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 OSMP13725 252 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 S100A5P33763 92 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 TRIM23P36406 574 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 ACTR1BP42025 376 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 BCAP31P51572 246 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 ACTR1AP61163 376 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 ELOAQ14241 798 aaKnown RBP10.9□□□□□ -0.66
PTPN2-201ENST00000309660 CLEC12AQ5QGZ9 265 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 PODNL1Q6PEZ8 512 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 MTSS1LQ765P7 747 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SLC30A8Q8IWU4 369 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 AMER2Q8N7J2 671 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 OR4K5Q8NGD3 323 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 OTULINQ96BN8 352 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 ZG16BQ96DA0 208 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 MS4A6EQ96DS6 147 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 KCNS3Q9BQ31 491 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 APOOQ9BUR5 198 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 PALMDQ9NP74 551 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 FTSJ1Q9UET6 329 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 TBC1D29Q9UFV1 150 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 A0A0A6YYD5 115 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 ZAR1LA6NP61 321 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 CHRM4P08173 479 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 HOXB2P14652 356 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 OLR1P78380 273 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 CD300CQ08708 224 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 MADCAM1Q13477 382 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SHHQ15465 462 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 RPE65Q16518 533 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 PPP2R2DQ66LE6 453 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 RRM2BQ7LG56 351 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SLC46A3Q7Z3Q1 461 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 PSD4Q8NDX1 1056 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SLC9A6Q92581 669 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SIGLEC11Q96RL6 698 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 GSAPA4D1B5 854 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 CPSF4LA6NMK7 179 aaKnown RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 RASGRP1O95267 797 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 ADAP00813 363 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 GABRB1P18505 474 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 GTF2E2P29084 291 aaKnown RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 PKLRP30613 574 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 LIMS1P48059 325 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 HMGA2P52926 109 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 MAP4K2Q12851 820 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 ABHD17CQ6PCB6 329 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 TMEFF1Q8IYR6 380 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 TBC1D19Q8N5T2 526 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 PLCXD1Q9NUJ7 323 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 GIMAP4Q9NUV9 329 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 GPR52Q9Y2T5 361 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 EFCAB10A6NFE3 127 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 WWP2O00308 870 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 MAN2B1O00754 1011 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 CH25HO95992 272 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 ALOX12P18054 663 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 ATP5A1P25705 553 aaKnown RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 CMPK1P30085 196 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 RFX3P48380 749 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 KHKP50053 298 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 TAS2R41P59536 307 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 TMEM196Q5HYL7 178 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 KIAA1161Q6NSJ0 714 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 PGBD2Q6P3X8 592 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 PAQR6Q6TCH4 344 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 C16orf62Q7Z3J2 963 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 SLC22A16Q86VW1 577 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 MFSD4AQ8N468 514 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 OR2L8Q8NGY9 312 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 TMEM203Q969S6 136 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 VMP1Q96GC9 406 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 CNPPD1Q9BV87 410 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 NKX2-4Q9H2Z4 354 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 C6orf106Q9H6K1 298 aaPredicted RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 ACSS1Q9NUB1 689 aaPredicted RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 TBCCD1Q9NVR7 557 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 IL20RAQ9UHF4 553 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 CAB39Q9Y376 341 aaPredicted RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 TSC22D4Q9Y3Q8 395 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 DNMT3AQ9Y6K1 912 aaPredicted RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 TRIOO75962 3097 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 KIAA1549LQ6ZVL6 1849 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 SMIM30A4D0T7 59 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 EPOPA6NHQ4 379 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 KIAA0513O60268 411 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 DRD2P14416 443 aa10.89□□□□□ -0.67
PTPN2-201ENST00000309660 CSNK2A2P19784 350 aaPredicted RBP10.89□□□□□ -0.67
PTPN2-201ENST00000309660 ADPRHP54922 357 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms