RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 RFTN2Q52LD8 501 aaPredicted RBP18.38■□□□□ 0.53
VEGFB-201ENST00000309422 IL20RBQ6UXL0 311 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 DGAT2L6Q6ZPD8 337 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 RTL4Q6ZR62 310 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 AMER2Q8N7J2 671 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 GALNT11Q8NCW6 608 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 MDS2Q8NDY4 140 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 OR9A2Q8NGT5 310 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 ZNF675Q8TD23 568 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 DOK4Q8TEW6 326 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 GFM2Q969S9 779 aaKnown RBP18.38■□□□□ 0.53
VEGFB-201ENST00000309422 MIB2Q96AX9 1013 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 MTERF3Q96E29 417 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 SGCZQ96LD1 299 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 PPP1R36Q96LQ0 422 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 SIGLEC12Q96PQ1 595 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 LIN28AQ9H9Z2 209 aaKnown RBP18.38■□□□□ 0.53
VEGFB-201ENST00000309422 SH3BP4Q9P0V3 963 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 HRKO00198 91 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 AKAP10O43572 662 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 PRKNO60260 465 aaPredicted RBP18.37■□□□□ 0.53
VEGFB-201ENST00000309422 LRATO95237 230 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 ARRB2P32121 409 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 DCAF7P61962 342 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 PSPHP78330 225 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 KCNC4Q03721 635 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 MAP4K2Q12851 820 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 SMU1Q2TAY7 513 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 PRICKLE4Q2TBC4 344 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 PRR30Q53SZ7 412 aaPredicted RBP18.37■□□□□ 0.53
VEGFB-201ENST00000309422 FAM180BQ6P0A1 224 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 GALNTL5Q7Z4T8 443 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 LIX1Q8N485 282 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 POGLUT1Q8NBL1 392 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 ADCY4Q8NFM4 1077 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 DNAJB8Q8NHS0 232 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 CLHC1Q8NHS4 586 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 GRHL3Q8TE85 626 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 ZBED6CLQ96FA7 236 aaPredicted RBP18.37■□□□□ 0.53
VEGFB-201ENST00000309422 SCMH1Q96GD3 660 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 FCRL1Q96LA6 429 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 SH3GL2Q99962 352 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 C1orf50Q9BV19 199 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 TRIM45Q9H8W5 580 aaPredicted RBP18.37■□□□□ 0.53
VEGFB-201ENST00000309422 DDX18Q9NVP1 670 aaKnown RBP18.37■□□□□ 0.53
VEGFB-201ENST00000309422 ASF1BQ9NVP2 202 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 MAT2BQ9NZL9 334 aa18.37■□□□□ 0.53
VEGFB-201ENST00000309422 UQCRHLA0A096LP55 91 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 A0A1W2PS29 197 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 NME2P1O60361 137 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 NEURL1O76050 574 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 P04436 131 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 BCKDHAP12694 445 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 NME2P22392 152 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 SOX3P41225 446 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 SRSF11Q05519 484 aaKnown RBP18.36■□□□□ 0.53
VEGFB-201ENST00000309422 NATD1Q8N6N6 113 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 GOLM1Q8NBJ4 401 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 C17orf47Q8NEP4 570 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 OR52R1Q8NGF1 315 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 FAR1Q8WVX9 515 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 TP53INP1Q96A56 240 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 ZNF764Q96H86 408 aaPredicted RBP18.36■□□□□ 0.53
VEGFB-201ENST00000309422 ZNF681Q96N22 645 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 NUF2Q9BZD4 464 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 TAS2R9Q9NYW1 312 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 TAS2R7Q9NYW3 318 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 HAO1Q9UJM8 370 aa18.36■□□□□ 0.53
VEGFB-201ENST00000309422 ACOT7O00154 380 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 TP53I11O14683 189 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 OR6B1O95007 311 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 JUNP05412 331 aaKnown RBP18.35■□□□□ 0.53
VEGFB-201ENST00000309422 CT62P0C5K7 136 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 PCSK2P16519 638 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 TACR1P25103 407 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 KRT20P35900 424 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 ST13P50502 369 aaKnown RBP18.35■□□□□ 0.53
VEGFB-201ENST00000309422 NR0B1P51843 470 aaKnown RBP18.35■□□□□ 0.53
VEGFB-201ENST00000309422 PPP2R2AP63151 447 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 ZNHIT3Q15649 155 aaPredicted RBP18.35■□□□□ 0.53
VEGFB-201ENST00000309422 LTB4RQ15722 352 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 IGFBP7Q16270 282 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 TTMPQ5BVD1 217 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 ZNF628Q5EBL2 1059 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 PIGGQ5H8A4 983 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 C6orf136Q5SQH8 315 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 IL23RQ5VWK5 629 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 SZRD1Q7Z422 152 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 LRRC34Q8IZ02 419 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 FAM13CQ8NE31 585 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 SORT1Q99523 831 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 INTS9Q9NV88 658 aaKnown RBP18.35■□□□□ 0.53
VEGFB-201ENST00000309422 MARCOQ9UEW3 520 aaPredicted RBP18.35■□□□□ 0.53
VEGFB-201ENST00000309422 ZNF462Q96JM2 2506 aa18.35■□□□□ 0.53
VEGFB-201ENST00000309422 TCP11X1B4DZS4 312 aa18.34■□□□□ 0.53
VEGFB-201ENST00000309422 KLF11O14901 512 aa18.34■□□□□ 0.53
VEGFB-201ENST00000309422 SCAMP2O15127 329 aaKnown RBP18.34■□□□□ 0.53
VEGFB-201ENST00000309422 HDAC3O15379 428 aa18.34■□□□□ 0.53
VEGFB-201ENST00000309422 KITP10721 976 aa18.34■□□□□ 0.53
VEGFB-201ENST00000309422 EDN3P14138 238 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms