RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ELP4Q96EB1 424 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 MAGED4Q96JG8 741 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 GFM1Q96RP9 751 aaKnown RBP6.53□□□□□ -1.36
PTCD2-201ENST00000308077 RAD21L1Q9H4I0 556 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 TMEM38AQ9H6F2 299 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 ZCCHC3Q9NUD5 404 aaKnown RBP6.53□□□□□ -1.36
PTCD2-201ENST00000308077 DCAF13Q9NV06 445 aaKnown RBP6.53□□□□□ -1.36
PTCD2-201ENST00000308077 ARMC1Q9NVT9 282 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 SIDT1Q9NXL6 827 aaKnown RBP6.53□□□□□ -1.36
PTCD2-201ENST00000308077 STOML1Q9UBI4 398 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 FAF1Q9UNN5 650 aaPredicted RBP6.53□□□□□ -1.36
PTCD2-201ENST00000308077 AURKCQ9UQB9 309 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 CLDN16Q9Y5I7 305 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 SPACA6W5XKT8 324 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 NOTCH2Q04721 2471 aa6.53□□□□□ -1.36
PTCD2-201ENST00000308077 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 PRAMEF27A3QJZ7 478 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 H0YIG0 161 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 HMGN4O00479 90 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 CASQ2O14958 399 aaPredicted RBP6.52□□□□□ -1.36
PTCD2-201ENST00000308077 FLRT2O43155 660 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 NME6O75414 186 aaPredicted RBP6.52□□□□□ -1.36
PTCD2-201ENST00000308077 JRKO75564 520 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 CDC123O75794 336 aaPredicted RBP6.52□□□□□ -1.36
PTCD2-201ENST00000308077 TIAF1O95411 115 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 LDOC1O95751 146 aaPredicted RBP6.52□□□□□ -1.36
PTCD2-201ENST00000308077 GPR75O95800 540 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 MT-ND1P03886 318 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 GPIP06744 558 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 ARAFP10398 606 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 ACP1P24666 158 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 PSMA4P25789 261 aaKnown RBP6.52□□□□□ -1.36
PTCD2-201ENST00000308077 OR1D4P47884 311 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 AVPR1BP47901 424 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 PDX1P52945 283 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 SKP1P63208 163 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 VEZF1Q14119 521 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 MAPK11Q15759 364 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 LRRC23Q53EV4 343 aaPredicted RBP6.52□□□□□ -1.36
PTCD2-201ENST00000308077 ZNF628Q5EBL2 1059 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 MTX3Q5HYI7 312 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 TBCELQ5QJ74 424 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 WLSQ5T9L3 541 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 LPCAT4Q643R3 524 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 NIPAL1Q6NVV3 410 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 FAM111BQ6SJ93 734 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 CEACAM20Q6UY09 585 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 DGAT2L6Q6ZPD8 337 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 SZRD1Q7Z422 152 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 C11orf65Q8NCR3 313 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 PAPD5Q8NDF8 572 aaKnown RBP6.52□□□□□ -1.36
PTCD2-201ENST00000308077 OR5D16Q8NGK9 328 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 OR10Q1Q8NGQ4 319 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 OR51Q1Q8NH59 317 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 NFKBIDQ8NI38 313 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 RHBDD1Q8TEB9 315 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 RAB8BQ92930 207 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 GIMAP5Q96F15 307 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 OTUB1Q96FW1 271 aaPredicted RBP6.52□□□□□ -1.36
PTCD2-201ENST00000308077 SLC35G5Q96KT7 338 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 SEPHS2Q99611 448 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 DPYSL5Q9BPU6 564 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 SEMA3GQ9NS98 782 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 OLAHQ9NV23 265 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 SERTAD3Q9UJW9 196 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 ANAPC2Q9UJX6 822 aa6.52□□□□□ -1.36
PTCD2-201ENST00000308077 FRYLO94915 3013 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 ASCC3Q8N3C0 2202 aaKnown RBP6.52□□□□□ -1.37
PTCD2-201ENST00000308077 TMEM229AB2RXF0 380 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 UPK1AO00322 258 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 DSCR3O14972 297 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 EMC8O43402 210 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 GDF9O60383 454 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 TPST1O60507 370 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 GMNNO75496 209 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 ATP1B1P05026 303 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 HMGN2P05204 90 aaKnown RBP6.52□□□□□ -1.37
PTCD2-201ENST00000308077 FHP07954 510 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 CT62P0C5K7 136 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 OR12D1P0DN82 309 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 UMPSP11172 480 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 ALAS2P22557 587 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 PEX2P28328 305 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 AQP1P29972 269 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 KDELR2P33947 212 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 XCR1P46094 333 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 PRKAG1P54619 331 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 DSTNP60981 165 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 BTG2P78543 158 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 SPEM2Q0P670 501 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 MGAT2Q10469 447 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 SCARB2Q14108 478 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 LASP1Q14847 261 aaKnown RBP6.52□□□□□ -1.37
PTCD2-201ENST00000308077 FAM214AQ32MH5 1076 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 PHF19Q5T6S3 580 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 FHL5Q5TD97 284 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 TLDC1Q6P9B6 456 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 AMIGO2Q86SJ2 522 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 GPR135Q8IZ08 494 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 SAMD14Q8IZD0 417 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms