RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 FUBP1Q96AE4 644 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 PRSS21Q9Y6M0 314 aa10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 ZNF43P17038 809 aa10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 ADPRHP54922 357 aa10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 OR9A4Q8NGU2 314 aa10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 PITX2Q99697 317 aa10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 VNN3Q9NY84 501 aa10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 ACSL6Q9UKU0 697 aa10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 BOKQ9UMX3 212 aaPredicted RBP10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 SLC7A11Q9UPY5 501 aa10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 YBX2Q9Y2T7 364 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-201ENST00000307142 LY75O60449 1722 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 EIF3FO00303 357 aaPredicted RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 ZP2Q05996 745 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 RBM48Q5RL73 367 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 B3GNT6Q6ZMB0 384 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 YTHDF3Q7Z739 585 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 ZADH2Q8N4Q0 377 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 OR5K2Q8NHB8 316 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 COQ10BQ9H8M1 238 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 RREB1Q92766 1687 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 AREL1O15033 823 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 HSPA12AO43301 675 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 PPM1BO75688 479 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 ALDOAP04075 364 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 MAT1AQ00266 395 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 TFF2Q03403 129 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 PPP1R8Q12972 351 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 CCDC92Q53HC0 331 aaPredicted RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 RANBP10Q6VN20 620 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 PIK3R3Q92569 461 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 MKLN1Q9UL63 735 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 NENFQ9UMX5 172 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 A0A096LPI6 279 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 TLX2O43763 284 aaPredicted RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 NPPAP01160 153 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 RGRP47804 291 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 ENPP6Q6UWR7 440 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 UEVLDQ8IX04 471 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 VWA5B2Q8N398 1253 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 TESCQ96BS2 214 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 AURKBQ96GD4 344 aaPredicted RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 OR51B6Q9H340 312 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 PIGUQ9H490 435 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 TM7SF3Q9NS93 570 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 GGT3PA6NGU5 568 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 UNC119BA6NIH7 251 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 ATE1O95260 518 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 PRLP01236 227 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 HOXD8P13378 290 aaPredicted RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 WDR4P57081 412 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 ATG9BQ674R7 924 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 KDELC1Q6UW63 502 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 DGLUCYQ7Z3D6 616 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 CD200R1Q8TD46 325 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 FGF14Q92915 247 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 MSLNLQ96KJ4 702 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 INSM2Q96T92 566 aaPredicted RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 POLR2J2Q9GZM3 115 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 CDH20Q9HBT6 801 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 DMRT3Q9NQL9 472 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 PLEKHA6Q9Y2H5 1048 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 ZNF16P17020 682 aaPredicted RBP10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 NR1H2P55055 460 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 DIO3P55073 304 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 ADAM8P78325 824 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 CCDC80Q76M96 950 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 NINJ1Q92982 152 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 SMIM14Q96QK8 99 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 GINS4Q9BRT9 223 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 NANSQ9NR45 359 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 POMPQ9Y244 141 aa10.17□□□□□ -0.78
SYNPO2-201ENST00000307142 NUAK1O60285 661 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 MC3RP41968 323 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 RSPO2Q6UXX9 243 aaPredicted RBP10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 ARHGAP12Q8IWW6 846 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 POC5Q8NA72 575 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 GAL3ST3Q96A11 431 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 CCDC74AQ96AQ1 378 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 NODALQ96S42 347 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 SORBS1Q9BX66 1292 aaKnown RBP10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 SARDHQ9UL12 918 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 ZNF879B4DU55 563 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 HOXC11O43248 304 aaPredicted RBP10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 PRKCAP17252 672 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 GSK3BP49841 420 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 ZNF140P52738 457 aaPredicted RBP10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 HSD11B2P80365 405 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 TLE3Q04726 772 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 SLCO6A1Q86UG4 719 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 SLC44A3Q8N4M1 653 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 RHBDF1Q96CC6 855 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 APIPQ96GX9 242 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 PGAM5Q96HS1 289 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 BMFQ96LC9 184 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 FN3KQ9H479 309 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 GPR39O43194 453 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 CCR7P32248 378 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 ARHGAP19Q14CB8 494 aa10.16□□□□□ -0.78
SYNPO2-201ENST00000307142 PRAMEF8Q5VWM4 474 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms