RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ASB15Q8WXK1 588 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 FAM46AQ96IP4 442 aaKnown RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 C7orf34Q96L11 122 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 ITGB1BP2Q9UKP3 347 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 CHURC1-FNTBB4DL54 471 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 ATG13O75143 517 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 PAICSP22234 425 aaKnown RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 CXCR2P25025 360 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 SPINT3P49223 89 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 SRP9P49458 86 aaKnown RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 DGKGP49619 791 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 AP2S1P53680 142 aaPredicted RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 SPATS1Q496A3 300 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 GPR33Q49SQ1 333 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 ESPNLQ6ZVH7 1005 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 OR4K5Q8NGD3 323 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 TEX47Q8TBZ9 253 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 SIPA1Q96FS4 1042 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 CNDP2Q96KP4 475 aaKnown RBP13.83□□□□□ -0.2
PTPN9-201ENST00000306726 BARHL1Q9BZE3 327 aa13.83□□□□□ -0.2
PTPN9-201ENST00000306726 NYNRINQ9P2P1 1898 aaKnown RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 POM121CA8CG34 1229 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 GRXCR1A8MXD5 290 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 DVL2O14641 736 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 SOX30O94993 753 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 GPX2P18283 190 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 DDX6P26196 483 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 MAT2AP31153 395 aaKnown RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 ST8SIA6P61647 398 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 STXBP1P61764 594 aaKnown RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 DOC2BQ14184 412 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 LY6G5CQ5SRR4 150 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 ORAI1Q96D31 301 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 DPCDQ9BVM2 203 aaPredicted RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 NDRG2Q9UN36 371 aaKnown RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 TRIM64A6NGJ6 449 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 H3BQ06 376 aaPredicted RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 POLR2EP19388 210 aaKnown RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 TALDO1P37837 337 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 ASMTP46597 345 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 PRPF38BQ5VTL8 546 aaKnown RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 FAM205BPQ63HN1 556 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 C6orf120Q7Z4R8 191 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 SAMD12Q8N8I0 201 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 DCAF4L2Q8NA75 395 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 OR5AR1Q8NGP9 310 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 OR6F1Q8NGZ6 308 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 C16orf78Q8WTQ4 265 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF480Q8WV37 535 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 GCDHQ92947 438 aaPredicted RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 C12orf66Q96MD2 445 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 CXorf36Q9H7Y0 433 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 TM7SF3Q9NS93 570 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 ACER3Q9NUN7 267 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 GULP1Q9UBP9 304 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 TBC1D24Q9ULP9 559 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 AP3M1Q9Y2T2 418 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 GRM6O15303 877 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 PRKAR1AP10644 381 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 FUT1P19526 365 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 PPP2R1BP30154 601 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 CALHM3Q86XJ0 350 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 LACC1Q8IV20 430 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 NEIL3Q8TAT5 605 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 OR2B2Q9GZK3 357 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 EXTL2Q9UBQ6 330 aa13.82□□□□□ -0.2
PTPN9-201ENST00000306726 PPIEQ9UNP9 301 aaKnown RBP13.82□□□□□ -0.2
PTPN9-201ENST00000306726 A0A0B4J203 849 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF860A6NHJ4 632 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 PRR23D1E9PI22 279 aaPredicted RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 POP7O75817 140 aaKnown RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 PAPLNO95428 1278 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 C1SP09871 688 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 PRR23D2P0DMB1 279 aaPredicted RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 CYP2A6P11509 494 aaPredicted RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 JUNDP17535 347 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 CD9P21926 228 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ETV5P41161 510 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ETV1P50549 477 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 FAM109BQ6ICB4 259 aaPredicted RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ACSM5Q6NUN0 579 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 GDPD4Q6W3E5 623 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 RASGEF1AQ8N9B8 481 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF671Q8TAW3 534 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 BCL7BQ9BQE9 202 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 C1QTNF6Q9BXI9 259 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 CUEDC1Q9NWM3 386 aaPredicted RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 EIF3KQ9UBQ5 218 aaKnown RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 NPIPA5A0A0B4J1W7 369 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 NPIPA7E9PJI5 369 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 GATBO75879 557 aaKnown RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 NPIPA8P0DM63 369 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF8P17098 575 aaPredicted RBP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 NCBP2P52298 156 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTPN9-201ENST00000306726 LIM2P55344 173 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 ERVFC1P60507 584 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 DUSP6Q16828 381 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 LRIF1Q5T3J3 769 aa13.81□□□□□ -0.2
PTPN9-201ENST00000306726 UNC5DQ6UXZ4 953 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms