RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 DGLUCYQ7Z3D6 616 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 PLXDC1Q8IUK5 500 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 HS3ST5Q8IZT8 346 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 OR5AR1Q8NGP9 310 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 ZDHHC1Q8WTX9 485 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 MGLLQ99685 303 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 GXYLT2A0PJZ3 443 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 SOBPA7XYQ1 873 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 GPR37L1O60883 481 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 APOL3O95236 402 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 BMP2P12643 396 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 IL1RNP18510 177 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 VAMP1P23763 118 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 SOX2P48431 317 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 FIP1L1Q6UN15 594 aaKnown RBP15.18■□□□□ 0.02
USP42-201ENST00000306177 TMPRSS9Q7Z410 1059 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 PIANPQ8IYJ0 282 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 OR7G3Q8NG95 312 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 SORT1Q99523 831 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 FEVQ99581 238 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 ARNT2Q9HBZ2 717 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 GDE1Q9NZC3 331 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 A0A0U1RQS6 177 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 RGNQ15493 299 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 TCTE1Q5JU00 501 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 TRNP1Q6NT89 227 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 C1orf94Q6P1W5 598 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 TTLL10Q6ZVT0 673 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 LRR1Q96L50 414 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 CCDC115Q96NT0 180 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 NPLQ9BXD5 320 aaPredicted RBP15.18■□□□□ 0.02
USP42-201ENST00000306177 LATO43561 262 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 IFNA7P01567 189 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 AK4P27144 223 aaPredicted RBP15.18■□□□□ 0.02
USP42-201ENST00000306177 AKR1D1P51857 326 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 CDKL1Q00532 357 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 CBFBQ13951 182 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 HNRNPA1L2Q32P51 320 aaKnown RBP15.18■□□□□ 0.02
USP42-201ENST00000306177 SAMD12Q8N8I0 201 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 ACTRT3Q9BYD9 372 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 SLC6A15Q9H2J7 730 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 PAK1IP1Q9NWT1 392 aaPredicted RBP15.18■□□□□ 0.02
USP42-201ENST00000306177 ANKMY1Q9P2S6 941 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 EXTL2Q9UBQ6 330 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 SCP2D1Q9UJQ7 156 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 HCN2Q9UL51 889 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 MYH4Q9Y623 1939 aa15.18■□□□□ 0.02
USP42-201ENST00000306177 NPIPA2E9PIF3 369 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 NPIPA3F8WFD2 350 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 RETP07949 1114 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 ADORA3P0DMS8 318 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 CCNOP22674 350 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 RORAP35398 523 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 NAA10P41227 235 aaPredicted RBP15.17■□□□□ 0.02
USP42-201ENST00000306177 CSNK1DP48730 415 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 SPHARQ15513 63 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 LCTLQ6UWM7 567 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 LHFPL3Q86UP9 236 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 ACVR1CQ8NER5 493 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 OR5L2Q8NGL0 311 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 FKBP10Q96AY3 582 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 ZFYVE21Q9BQ24 234 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 TIGARQ9NQ88 270 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 C14orf166Q9Y224 244 aaKnown RBP15.17■□□□□ 0.02
USP42-201ENST00000306177 STSP08842 583 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 H2BFMP0C1H6 154 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 CEBPBP17676 345 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 FOXA1P55317 472 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 SYCE2Q6PIF2 218 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 TMED4Q7Z7H5 227 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 OR8K3Q8NH51 312 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 MAL2Q969L2 176 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 WDR77Q9BQA1 342 aaPredicted RBP15.17■□□□□ 0.02
USP42-201ENST00000306177 MTHFD2LQ9H903 347 aaPredicted RBP15.17■□□□□ 0.02
USP42-201ENST00000306177 SYNGR4O95473 234 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 SLC7A9P82251 487 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 RTL10Q7L3V2 364 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 HSD11B1LQ7Z5J1 315 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 PDZD3Q86UT5 571 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 CNTN4Q8IWV2 1026 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 TEX26Q8N6G2 289 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 THAP6Q8TBB0 222 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 PEX11GQ96HA9 241 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 TOX2Q96NM4 488 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 CITO14578 2027 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 GRXCR2A6NFK2 248 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 ADAM12O43184 909 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 ENTPD1P49961 510 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 ACTA2P62736 377 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 ACTG2P63267 376 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 DNASE1L3Q13609 305 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 NETO1Q8TDF5 533 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 THAP3Q8WTV1 239 aaPredicted RBP15.17■□□□□ 0.02
USP42-201ENST00000306177 INPP5KQ9BT40 448 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 ARMC1Q9NVT9 282 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 HSFX1Q9UBD0 423 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 BTNL2Q9UIR0 455 aa15.17■□□□□ 0.02
USP42-201ENST00000306177 MYF6P23409 242 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 GLP1RP43220 463 aa15.16■□□□□ 0.02
USP42-201ENST00000306177 ZNF84P51523 738 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms