RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 OR2T27Q8NH04 317 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 GINS3Q9BRX5 216 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 TAS2R8Q9NYW2 309 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 B4GALT7Q9UBV7 327 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 SPATA31E1Q6ZUB1 1445 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 TSPAN6O43657 245 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 PYCR1P32322 319 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 HES5Q5TA89 166 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 SVBPQ8N300 66 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF420Q8TAQ5 688 aaPredicted RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 ZFP57Q9NU63 452 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 C2orf42Q9NWW7 574 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 QPCTLQ9NXS2 382 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 GLTPQ9NZD2 209 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 MYO5BQ9ULV0 1848 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 CEP290O15078 2479 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 RAB19A4D1S5 217 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 MATN3O15232 486 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 F7P08709 466 aaPredicted RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 M6PRP20645 277 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 PIM3Q86V86 326 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 TSPEARQ8WU66 669 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 RNF32Q9H0A6 362 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 TCAPO15273 167 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 PBX3P40426 434 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF33AQ06730 810 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 MAP1SQ66K74 1059 aaPredicted RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 ARHGAP11AQ6P4F7 1023 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 TPRA1Q86W33 373 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 OR1E3Q8WZA6 343 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 CD48P09326 243 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 SSX9Q7RTT3 188 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 ANKRD13BQ86YJ7 626 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 DEFB119Q8N690 84 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 OR2T35Q8NGX2 323 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 NPRL2Q8WTW4 380 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 CD300LBA8K4G0 201 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 FAM155AB1AL88 458 aaPredicted RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 MSCO60682 206 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 OXSR1O95747 527 aaPredicted RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 RPL23AP62750 156 aaKnown RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 TAF9Q16594 264 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 OR1J4Q8NGS1 313 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 BIRC7Q96CA5 298 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 QRSL1Q9H0R6 528 aaKnown RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 MAGED1Q9Y5V3 778 aaPredicted RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 POM121CA8CG34 1229 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 MED6O75586 246 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 PNMTP11086 282 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 YIF1BQ5BJH7 314 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
TRIM56-201ENST00000306085 LHX5Q9H2C1 402 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 FSCN2O14926 492 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 B4GALT5O43286 388 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 GSK3BP49841 420 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 UBE2G2P60604 165 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 GINS1Q14691 196 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 MPPED2Q15777 294 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 ARSIQ5FYB1 569 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF425Q6IV72 752 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 THOC6Q86W42 341 aaKnown RBP12.83□□□□□ -0.35
TRIM56-201ENST00000306085 FNDC9Q8TBE3 224 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 ACTL8Q9H568 366 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 PLA2R1Q13018 1463 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 MYO3AQ8NEV4 1616 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 UNC13AQ9UPW8 1703 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 LOC102723532A0A0G2JNH3 316 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 TCRBV7S2A1N4TA0A589 114 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 EFCAB7A8K855 629 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 MTX2O75431 263 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 TGM4P49221 684 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 RABGGTBP53611 331 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 NRROSQ86YC3 692 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 ACOT11Q8WXI4 607 aaPredicted RBP12.83□□□□□ -0.35
TRIM56-201ENST00000306085 TMEM234Q8WY98 164 aa12.83□□□□□ -0.35
TRIM56-201ENST00000306085 GSCP56915 257 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 GRIK5Q16478 980 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 NLKQ9UBE8 527 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 HTR3BO95264 441 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 TYRP1P17643 537 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 PAPD5Q8NDF8 572 aaKnown RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 RAB8BQ92930 207 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 HECW2Q9P2P5 1572 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 ADM5C9JUS6 153 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 ITM2AO43736 263 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 SOX30O94993 753 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 NDUFAF5Q5TEU4 345 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 STEAP4Q687X5 459 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 INTS12Q96CB8 462 aaKnown RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 TXNDC15Q96J42 360 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 RPL7P18124 248 aaKnown RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 UBE2NP61088 152 aaKnown RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 POU6F2P78424 691 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 HMGN2P46Q86SG4 172 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 MMAAQ8IVH4 418 aaKnown RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 BANPQ8N9N5 519 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 OR4K15Q8NH41 348 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms