RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SMAD3P84022 425 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 SNTA1Q13424 505 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 CAMK2DQ13557 499 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 DOC2AQ14183 400 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 SUZ12Q15022 739 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 TATDN3Q17R31 274 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ZNF630Q2M218 657 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 LGALSLQ3ZCW2 172 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 CYP27C1Q4G0S4 372 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ESCO2Q56NI9 601 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 HABP4Q5JVS0 413 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 C1orf94Q6P1W5 598 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 LINGO4Q6UY18 593 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 UBE3DQ7Z6J8 389 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ASPGQ86U10 573 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 PDZD3Q86UT5 571 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 THOC6Q86W42 341 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 LILRA3Q8N6C8 439 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 LSM14AQ8ND56 463 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 OR52H1Q8NGJ2 320 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 OR51Q1Q8NH59 317 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 DNAJA4Q8WW22 397 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 SNAPC3Q92966 411 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 SCARF2Q96GP6 870 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 DMRTB1Q96MA1 342 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 UTP23Q9BRU9 249 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 WDR70Q9NW82 654 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 PIPOXQ9P0Z9 390 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ZMIZ1Q9ULJ6 1067 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 HCN4Q9Y3Q4 1203 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 A0A0A6YYJ9 748 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ANKRD61A6NGH8 418 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 LEFTY2O00292 366 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 HMGN4O00479 90 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ADAMDEC1O15204 470 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 INHAP05111 366 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 H2AFB1P0C5Y9 115 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 H2AFB2P0C5Z0 115 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 NR2F6P10588 404 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ZNF250P15622 560 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 NPPBP16860 134 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 RHCEP18577 417 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 POLR2CP19387 275 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 PPM1AP35813 382 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 RRAS2P62070 204 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 SNRPNP63162 240 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 MC1RQ01726 317 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 TMEM215Q68D42 235 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ZER1Q7Z7L7 766 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 C11orf96Q7Z7L8 435 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 PLD3Q8IV08 490 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 OR52P1PQ8NH57 321 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 SLC7A13Q8TCU3 470 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ASZ1Q8WWH4 475 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 NR4A3Q92570 626 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 HOXB13Q92826 284 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 NEURL3Q96EH8 262 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 MKRN2Q9H000 416 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 CHRDQ9H2X0 955 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 REEP4Q9H6H4 257 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 CXorf36Q9H7Y0 433 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 BRD9Q9H8M2 597 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 REEP1Q9H902 201 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 TRPV4Q9HBA0 871 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 BCL2L10Q9HD36 194 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 EXOSC3Q9NQT5 275 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 SEC14L4Q9UDX3 406 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ZNF229Q9UJW7 825 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 SLC22A14Q9Y267 594 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 EXPH5Q8NEV8 1989 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 A0A1W2PQL4 384 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 TBKBP1A7MCY6 615 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 CCNB2O95067 398 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ADAP00813 363 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 TPOP07202 933 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ALOX12P18054 663 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 CXCL3P19876 107 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 SLC2A5P22732 501 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 MYL9P24844 172 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 CALCRP30988 508 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 FEN1P39748 380 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 RFX3P48380 749 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 SPHARQ15513 63 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ZFP69Q49AA0 526 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 TMEM255AQ5JRV8 349 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 C6orf132Q5T0Z8 1188 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ARMC4Q5T2S8 1044 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 METAP1DQ6UB28 335 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 ADAMTSL4Q6UY14 1074 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 SLC39A5Q6ZMH5 540 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS50-202ENST00000305866 ETFBKMTQ8IXQ9 262 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 WDR48Q8TAF3 677 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 WFIKKN2Q8TEU8 576 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ZNF558Q96NG5 402 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 EFCAB11Q9BUY7 163 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 NDEL1Q9GZM8 345 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 HMX1Q9NP08 348 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 DMRT3Q9NQL9 472 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 MRPL17Q9NRX2 175 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms