RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 RABEP2Q9H5N1 569 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 CACNA1GO43497 2377 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 CEACAM4O75871 244 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 POLR2JP52435 117 aaKnown RBP22.77■■□□□ 1.24
HOXC9-201ENST00000303450 MLC1Q15049 377 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 ANXA8L1Q5VT79 327 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 TMEM107Q6UX40 140 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 OR7G1Q8NGA0 311 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 ERP27Q96DN0 273 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 SLC25A23Q9BV35 468 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 OR10A5Q9H207 317 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 PTGFRNQ9P2B2 879 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 BCAP29Q9UHQ4 241 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 ZNF639Q9UID6 485 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 ZNF223Q9UK11 482 aaPredicted RBP22.77■■□□□ 1.24
HOXC9-201ENST00000303450 MKRN2OSH3BPM6 223 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 ZFAND5O76080 213 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 IL6P05231 212 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 PGRP06401 933 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 S1PR1P21453 382 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 MC3RP41968 323 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 DGKQP52824 942 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 SLC37A1P57057 533 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 EXOSC7Q15024 291 aaKnown RBP22.76■■□□□ 1.23
HOXC9-201ENST00000303450 LINC00303Q3SY05 128 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 AGAP7PQ5VUJ5 663 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 SLC5A8Q8N695 610 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 OR5P2Q8WZ92 322 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 PSMF1Q92530 271 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 AGAP4Q96P64 663 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 CCDC167Q9P0B6 97 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 TEKT2Q9UIF3 430 aa22.76■■□□□ 1.23
HOXC9-201ENST00000303450 FAM234BA2RU67 622 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 RNASET2O00584 256 aaKnown RBP22.75■■□□□ 1.23
HOXC9-201ENST00000303450 CFLARO15519 480 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 SNX3O60493 162 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 PLOD3O60568 738 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 BCAS2O75934 225 aaPredicted RBP22.75■■□□□ 1.23
HOXC9-201ENST00000303450 C6orf47O95873 294 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 SOX18P35713 384 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 WNT3P56703 355 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 PHC1P78364 1004 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 OR7G2Q8NG99 324 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 OR8K3Q8NH51 312 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 THAP3Q8WTV1 239 aaPredicted RBP22.75■■□□□ 1.23
HOXC9-201ENST00000303450 TTC9Q92623 222 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 ELP4Q96EB1 424 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 OR52E6Q96RD3 313 aa22.75■■□□□ 1.23
HOXC9-201ENST00000303450 FAM120CQ9NX05 1096 aaKnown RBP22.75■■□□□ 1.23
HOXC9-201ENST00000303450 NUP214P35658 2090 aaPredicted RBP22.74■■□□□ 1.23
HOXC9-201ENST00000303450 PRSS51A0A1B0GVH4 220 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 OR6C76A6NM76 312 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 PLOD2O00469 737 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 SHOX2O60902 331 aaPredicted RBP22.74■■□□□ 1.23
HOXC9-201ENST00000303450 CBX7O95931 251 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 CLPSP04118 112 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 ALPPP05187 535 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 RNF4P78317 190 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 AGKQ53H12 422 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 CRB2Q5IJ48 1285 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 H3F3CQ6NXT2 135 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 SLC29A4Q7RTT9 530 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 ANKRD46Q86W74 232 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 ZNF615Q8N8J6 731 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 OR52R1Q8NGF1 315 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 OR5L2Q8NGL0 311 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 MAGED4Q96JG8 741 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 ZNF385DQ9H6B1 395 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 ZNF552Q9H707 407 aaPredicted RBP22.74■■□□□ 1.23
HOXC9-201ENST00000303450 ANKRA2Q9H9E1 313 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 MRGBPQ9NV56 204 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 DDX18Q9NVP1 670 aaKnown RBP22.74■■□□□ 1.23
HOXC9-201ENST00000303450 TMEM45AQ9NWC5 275 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 PCDHGB4Q9UN71 923 aa22.74■■□□□ 1.23
HOXC9-201ENST00000303450 PCDHGA9Q9Y5G4 932 aaKnown RBP22.74■■□□□ 1.23
HOXC9-201ENST00000303450 A0A087WV62 115 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 PRKNO60260 465 aaPredicted RBP22.73■■□□□ 1.23
HOXC9-201ENST00000303450 PRAMEF2O60811 474 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 ABCB1P08183 1280 aaPredicted RBP22.73■■□□□ 1.23
HOXC9-201ENST00000303450 FAM87AP0C7U9 286 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 CDK9P50750 372 aaKnown RBP22.73■■□□□ 1.23
HOXC9-201ENST00000303450 KCNK10P57789 538 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 B3GNTL1Q67FW5 361 aaPredicted RBP22.73■■□□□ 1.23
HOXC9-201ENST00000303450 FCRLBQ6BAA4 426 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 RPS19BP1Q86WX3 136 aaKnown RBP22.73■■□□□ 1.23
HOXC9-201ENST00000303450 C9orf40Q8IXQ3 194 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 CLECL1Q8IZS7 167 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 CPSF7Q8N684 471 aaKnown RBP22.73■■□□□ 1.23
HOXC9-201ENST00000303450 SIMC1Q8NDZ2 872 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 ZNF354BQ96LW1 612 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 NEUROD4Q9HD90 331 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 CFL2Q9Y281 166 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 SNX8Q9Y5X2 465 aa22.73■■□□□ 1.23
HOXC9-201ENST00000303450 SCN2BO60939 215 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 ZFP36L2P47974 494 aaKnown RBP22.72■■□□□ 1.23
HOXC9-201ENST00000303450 FHL5Q5TD97 284 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 ISLR2Q6UXK2 745 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 FUNDC1Q8IVP5 155 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 C16orf52Q8NHV5 167 aa22.72■■□□□ 1.23
HOXC9-201ENST00000303450 ABHD17AQ96GS6 310 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms