RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TPT1P13693 172 aaKnown RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 CCL23P55773 120 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF280AP59817 542 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SLC39A4Q6P5W5 647 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 POGLUT1Q8NBL1 392 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 OR7G2Q8NG99 324 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 MALSU1Q96EH3 234 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 GAL3ST1Q99999 423 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 HEBP1Q9NRV9 189 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 NME7Q9Y5B8 376 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 A6NHS1 94 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 GOSR2O14653 212 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 METAP1DQ6UB28 335 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 GTPBP8Q8N3Z3 284 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 OR5H2Q8NGV7 314 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 RPL10LQ96L21 214 aaKnown RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 OR14A2Q96R54 314 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SPIN2AQ99865 258 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SPIN2BQ9BPZ2 258 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ERVK13-1Q9NX77 482 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 E2F3O00716 465 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 TP53P04637 393 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 H2BFMP0C1H6 154 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 RAB3BP20337 219 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 FXYD6P3P58550 94 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SVBPQ8N300 66 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 CTPS2Q9NRF8 586 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 NRXN3Q9Y4C0 1643 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 A0A1W2PPL8 197 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 GJE1A6NN92 205 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 C2orf74A8MZ97 194 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 PRKACGP22612 351 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 HOXD13P35453 343 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 RPS5P46782 204 aaKnown RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 PLAG1Q6DJT9 500 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 RNF128Q8TEB7 428 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF689Q96CS4 500 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 MRGPRX2Q96LB1 330 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 DPYSL5Q9BPU6 564 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 TDP1Q9NUW8 608 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF701Q9NV72 531 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 TMEM181Q9P2C4 612 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 YIPF1Q9Y548 306 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SOWAHBA6NEL2 793 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 OR12D1P0DN82 309 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 CERS1P27544 350 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 FLT3LGP49771 235 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SEC13P55735 322 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 TXNRD3NBQ6F5E7 133 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ESAMQ96AP7 390 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 BORCS6Q96GS4 357 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 KLHL13Q9P2N7 655 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 FBXL3Q9UKT7 428 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF541Q9H0D2 1346 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 OSMP13725 252 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 PRKCAP17252 672 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 CDKN1CP49918 316 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 AGTR2P50052 363 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 MALLQ13021 153 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 CCDC58Q4VC31 144 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 UNC50Q53HI1 259 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF805Q5CZA5 627 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 OR6N2Q8NGY6 317 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ADAMTS16Q8TE57 1224 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SDR39U1Q9NRG7 319 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 GPR83Q9NYM4 423 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 PCDHGA7Q9Y5G6 932 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SLX4Q8IY92 1834 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ALS2Q96Q42 1657 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 CD8B2A6NJW9 211 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 FTCDNL1E5RQL4 147 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 CD8BP10966 210 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF616Q08AN1 781 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 RAB40BQ12829 278 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 OR51D1Q8NGF3 324 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SMAP2Q8WU79 429 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 PMEPA1Q969W9 287 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF597Q96LX8 424 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF649Q9BS31 505 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 TP63Q9H3D4 680 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 ZBTB20Q9HC78 741 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-201ENST00000302516 NPIPA2E9PIF3 369 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 NPIPA3F8WFD2 350 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 SSX5O60225 188 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 POP7O75817 140 aaKnown RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 UQCRC1P31930 480 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 GMPRP36959 345 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 CTSOP43234 321 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 BLOC1S1P78537 153 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 PCBP2Q15366 365 aaKnown RBP eCLIP7.29□□□□□ -1.241e-17■■■□□ 16.7
SF3B3-201ENST00000302516 MPP7Q5T2T1 576 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ASPGQ86U10 573 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 LRRC28Q86X40 367 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 KCT2Q8NC54 265 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 EMID1Q96A84 441 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 SYT3Q9BQG1 590 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 PELI2Q9HAT8 420 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 A0A1W2PQL4 384 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 RNASET2O00584 256 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms