RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 EMDP50402 254 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 OR4D2P58180 307 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 BNIP1Q12981 228 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 HSPB3Q12988 150 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 COQ5Q5HYK3 327 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 REP15Q6BDI9 236 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 TMEM107Q6UX40 140 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 ERMP1Q7Z2K6 904 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 ZNF248Q8NDW4 579 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 HOXB13Q92826 284 aaPredicted RBP8.84□□□□□ -0.99
RFX3-201ENST00000302303 RIT1Q92963 219 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 RCN3Q96D15 328 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 FAM120BQ96EK7 910 aaKnown RBP8.84□□□□□ -0.99
RFX3-201ENST00000302303 AURKBQ96GD4 344 aaPredicted RBP8.84□□□□□ -0.99
RFX3-201ENST00000302303 RBM18Q96H35 190 aaKnown RBP8.84□□□□□ -0.99
RFX3-201ENST00000302303 DGAT2Q96PD7 388 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 GPATCH1Q9BRR8 931 aaKnown RBP8.84□□□□□ -0.99
RFX3-201ENST00000302303 SLC39A3Q9BRY0 314 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 NUDT9Q9BW91 350 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 DPH1Q9BZG8 443 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 TRIM8Q9BZR9 551 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 SEMA4CQ9C0C4 833 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 SERHL2Q9H4I8 314 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 CCDC86Q9H6F5 360 aaKnown RBP8.84□□□□□ -0.99
RFX3-201ENST00000302303 C19orf53Q9UNZ5 99 aaPredicted RBP8.84□□□□□ -0.99
RFX3-201ENST00000302303 ENTPD4Q9Y227 616 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 DTX4Q9Y2E6 619 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 PADI2Q9Y2J8 665 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 APC2O95996 2303 aa8.84□□□□□ -1
RFX3-201ENST00000302303 A0A096LPI6 279 aa8.83□□□□□ -1
RFX3-201ENST00000302303 SAGE2PA6NJ88 616 aa8.83□□□□□ -1
RFX3-201ENST00000302303 RFXANKO14593 260 aa8.83□□□□□ -1
RFX3-201ENST00000302303 SEC24DO94855 1032 aaPredicted RBP8.83□□□□□ -1
RFX3-201ENST00000302303 UNC5CO95185 931 aa8.83□□□□□ -1
RFX3-201ENST00000302303 CPSF4O95639 269 aaKnown RBP8.83□□□□□ -1
RFX3-201ENST00000302303 IGHEP01854 428 aa8.83□□□□□ -1
RFX3-201ENST00000302303 IFNA16P05015 189 aa8.83□□□□□ -1
RFX3-201ENST00000302303 NT5EP21589 574 aa8.83□□□□□ -1
RFX3-201ENST00000302303 NTSP30990 170 aa8.83□□□□□ -1
RFX3-201ENST00000302303 OTX2P32243 289 aa8.83□□□□□ -1
RFX3-201ENST00000302303 MAN2A2P49641 1150 aa8.83□□□□□ -1
RFX3-201ENST00000302303 SLC37A1P57057 533 aa8.83□□□□□ -1
RFX3-201ENST00000302303 SLC26A5P58743 744 aa8.83□□□□□ -1
RFX3-201ENST00000302303 EEF1A2Q05639 463 aaKnown RBP8.83□□□□□ -1
RFX3-201ENST00000302303 GABPB1Q06547 395 aaPredicted RBP8.83□□□□□ -1
RFX3-201ENST00000302303 ZNF267Q14586 743 aaPredicted RBP8.83□□□□□ -1
RFX3-201ENST00000302303 EXOSC7Q15024 291 aaKnown RBP8.83□□□□□ -1
RFX3-201ENST00000302303 CRTC2Q53ET0 693 aaPredicted RBP8.83□□□□□ -1
RFX3-201ENST00000302303 SAXO2Q658L1 398 aa8.83□□□□□ -1
RFX3-201ENST00000302303 PAPD4Q6PIY7 484 aaKnown RBP8.83□□□□□ -1
RFX3-201ENST00000302303 MRGPREQ86SM8 312 aa8.83□□□□□ -1
RFX3-201ENST00000302303 SPACA3Q8IXA5 215 aa8.83□□□□□ -1
RFX3-201ENST00000302303 GALNT12Q8IXK2 581 aa8.83□□□□□ -1
RFX3-201ENST00000302303 MORN4Q8NDC4 146 aa8.83□□□□□ -1
RFX3-201ENST00000302303 SLC2A12Q8TD20 617 aa8.83□□□□□ -1
RFX3-201ENST00000302303 ELP5Q8TE02 316 aa8.83□□□□□ -1
RFX3-201ENST00000302303 ZFP90Q8TF47 636 aa8.83□□□□□ -1
RFX3-201ENST00000302303 KCNE4Q8WWG9 221 aa8.83□□□□□ -1
RFX3-201ENST00000302303 METTL21AQ8WXB1 218 aa8.83□□□□□ -1
RFX3-201ENST00000302303 SLC7A6OSQ96CW6 309 aaPredicted RBP8.83□□□□□ -1
RFX3-201ENST00000302303 FBXL20Q96IG2 436 aa8.83□□□□□ -1
RFX3-201ENST00000302303 NSL1Q96IY1 281 aa8.83□□□□□ -1
RFX3-201ENST00000302303 ITCHQ96J02 903 aa8.83□□□□□ -1
RFX3-201ENST00000302303 PANX1Q96RD7 426 aa8.83□□□□□ -1
RFX3-201ENST00000302303 P4HTMQ9NXG6 502 aa8.83□□□□□ -1
RFX3-201ENST00000302303 TAGLN3Q9UI15 199 aa8.83□□□□□ -1
RFX3-201ENST00000302303 LEF1Q9UJU2 399 aaPredicted RBP8.83□□□□□ -1
RFX3-201ENST00000302303 MGAQ8IWI9 3026 aa8.83□□□□□ -1
RFX3-201ENST00000302303 BBIP1A8MTZ0 92 aa8.82□□□□□ -1
RFX3-201ENST00000302303 MRASO14807 208 aa8.82□□□□□ -1
RFX3-201ENST00000302303 PCDH17O14917 1159 aa8.82□□□□□ -1
RFX3-201ENST00000302303 KLK10O43240 276 aa8.82□□□□□ -1
RFX3-201ENST00000302303 OR10H2O60403 315 aa8.82□□□□□ -1
RFX3-201ENST00000302303 ERN1O75460 977 aaKnown RBP8.82□□□□□ -1
RFX3-201ENST00000302303 ABCB1P08183 1280 aaPredicted RBP8.82□□□□□ -1
RFX3-201ENST00000302303 CCT3P49368 545 aaKnown RBP8.82□□□□□ -1
RFX3-201ENST00000302303 GZMMP51124 257 aa8.82□□□□□ -1
RFX3-201ENST00000302303 STX5Q13190 355 aa8.82□□□□□ -1
RFX3-201ENST00000302303 ATP1A4Q13733 1029 aa8.82□□□□□ -1
RFX3-201ENST00000302303 SELPLGQ14242 412 aa8.82□□□□□ -1
RFX3-201ENST00000302303 CAPRIN1Q14444 709 aaKnown RBP8.82□□□□□ -1
RFX3-201ENST00000302303 MAPRE2Q15555 327 aa8.82□□□□□ -1
RFX3-201ENST00000302303 RUNDC3AQ59EK9 446 aa8.82□□□□□ -1
RFX3-201ENST00000302303 PLAG1Q6DJT9 500 aa8.82□□□□□ -1
RFX3-201ENST00000302303 NANOGP8Q6NSW7 305 aa8.82□□□□□ -1
RFX3-201ENST00000302303 UNQ6494/PRO21346Q6UXR6 183 aa8.82□□□□□ -1
RFX3-201ENST00000302303 DNAJC14Q6Y2X3 702 aaPredicted RBP8.82□□□□□ -1
RFX3-201ENST00000302303 TMEM64Q6YI46 380 aa8.82□□□□□ -1
RFX3-201ENST00000302303 RINLQ6ZS11 566 aa8.82□□□□□ -1
RFX3-201ENST00000302303 NDUFAF7Q7L592 441 aa8.82□□□□□ -1
RFX3-201ENST00000302303 C9orf40Q8IXQ3 194 aa8.82□□□□□ -1
RFX3-201ENST00000302303 VWA5B2Q8N398 1253 aa8.82□□□□□ -1
RFX3-201ENST00000302303 KIF2BQ8N4N8 673 aa8.82□□□□□ -1
RFX3-201ENST00000302303 B3GNT7Q8NFL0 401 aa8.82□□□□□ -1
RFX3-201ENST00000302303 OR4A15Q8NGL6 344 aa8.82□□□□□ -1
RFX3-201ENST00000302303 OR1N1Q8NGS0 311 aa8.82□□□□□ -1
RFX3-201ENST00000302303 OR5AK3PQ8NH89 298 aa8.82□□□□□ -1
RFX3-201ENST00000302303 PSMF1Q92530 271 aa8.82□□□□□ -1
RFX3-201ENST00000302303 LRRC58Q96CX6 371 aa8.82□□□□□ -1
RFX3-201ENST00000302303 CMTM5Q96DZ9 223 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms