RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 IQCF1Q8N6M8 205 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 OR2L8Q8NGY9 312 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 RSPH9Q9H1X1 276 aaPredicted RBP12.86□□□□□ -0.35
CDH8-201ENST00000299345 METTL15A6NJ78 407 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 ASGR2P07307 311 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 CD40LGP29965 261 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 PODNL1Q6PEZ8 512 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 UBE3DQ7Z6J8 389 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 ADAMTS15Q8TE58 950 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 KCNS3Q9BQ31 491 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 TSSK6Q9BXA6 273 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 SNX7Q9UNH6 387 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 CCDC88CQ9P219 2028 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 HELZP42694 1942 aaKnown RBP12.86□□□□□ -0.35
CDH8-201ENST00000299345 PGRMC2O15173 223 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 RNGTTO60942 597 aaKnown RBP12.86□□□□□ -0.35
CDH8-201ENST00000299345 FHP07954 510 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 GABRB1P18505 474 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 LIMS1P48059 325 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 SOX9P48436 509 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 BTN3A2P78410 334 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 SPHARQ15513 63 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 MLF2Q15773 248 aaPredicted RBP12.86□□□□□ -0.35
CDH8-201ENST00000299345 ZNF750Q32MQ0 723 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 ZNF311Q5JNZ3 666 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 SUN3Q8TAQ9 357 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 TEX47Q8TBZ9 253 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 LHX9Q9NQ69 397 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 CRNNQ9UBG3 495 aaPredicted RBP12.86□□□□□ -0.35
CDH8-201ENST00000299345 ATG4BQ9Y4P1 393 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 KLK4Q9Y5K2 254 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 AGAP5A6NIR3 686 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 CERS1P27544 350 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDH8-201ENST00000299345 CD97P48960 835 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 TMED10P49755 219 aaKnown RBP12.85□□□□□ -0.35
CDH8-201ENST00000299345 RGS1Q08116 209 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 SLC13A2Q13183 592 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 NDUFA9Q16795 377 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 PGBD2Q6P3X8 592 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 LINC00471Q8N535 108 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 OR2L5Q8NG80 312 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 CDCA4Q9BXL8 241 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 TPK1Q9H3S4 243 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 RMI1Q9H9A7 625 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 TAS2R7Q9NYW3 318 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 TCF20Q9UGU0 1960 aaKnown RBP12.85□□□□□ -0.35
CDH8-201ENST00000299345 HAT1O14929 419 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 CCNYL3P0C7X3 344 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 PKLRP30613 574 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 ATP6V1E1P36543 226 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 CBX3Q13185 183 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 SLX4IPQ5VYV7 408 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 ZNF730Q6ZMV8 503 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 ZNF793Q6ZN11 406 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 A0A0A6YYD5 115 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 TAF4O00268 1085 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 ATP5A1P25705 553 aaKnown RBP12.85□□□□□ -0.35
CDH8-201ENST00000299345 TRIM23P36406 574 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 COX10Q12887 443 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 TUBA3EQ6PEY2 450 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 USP30Q70CQ3 517 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 OTULINQ96BN8 352 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 FKBP14Q9NWM8 211 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 HEBP2Q9Y5Z4 205 aa12.85□□□□□ -0.35
CDH8-201ENST00000299345 ARHGAP33O14559 1287 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 B4GALT2O60909 372 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 ALPPP05187 535 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 ZNF45Q02386 682 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 DUSP6Q16828 381 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 MEDAGQ5VYS4 303 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 C18orf63Q68DL7 685 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 KIAA1161Q6NSJ0 714 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 ABHD17CQ6PCB6 329 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 LACC1Q8IV20 430 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 OR8H2Q8N162 312 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 OR2L3Q8NG85 312 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 OR6T1Q8NGN1 323 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 HPS1Q92902 700 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 MS4A6EQ96DS6 147 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 C16orf58Q96GQ5 468 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 APOOQ9BUR5 198 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 MND1Q9BWT6 205 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 PRRG3Q9BZD7 231 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 GIN1Q9NXP7 522 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 GPC6Q9Y625 555 aaPredicted RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 A0A1W2PR48 441 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 MAN2B1O00754 1011 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 AP3D1O14617 1153 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 EMC8O43402 210 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 AIFM1O95831 613 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 CEACAM5P06731 702 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 TSPAN19P0C672 248 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 GTF2E2P29084 291 aaKnown RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 GRK5P34947 590 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 RPE65Q16518 533 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms