RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ZACNQ401N2 412 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 FAM74A1Q5RGS3 127 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 FCRL2Q96LA5 508 aaPredicted RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 CTRCQ99895 268 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 MXRA8Q9BRK3 442 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 CPVLQ9H3G5 476 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 RALYQ9UKM9 306 aaKnown RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 DSCAML1Q8TD84 2053 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 ELOA3CA0A087WX78 387 aaPredicted RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L10C9JJH3 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 KIAA0513O60268 411 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 AK1P00568 194 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 HNRNPA3P51991 378 aaKnown RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 MXD1Q05195 221 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 HNRNPA0Q13151 305 aaKnown RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 TEX44Q53QW1 395 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF440Q8IYI8 595 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF417Q8TAU3 575 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 EDEM1Q92611 657 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 SH3YL1Q96HL8 342 aaPredicted RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 PINK1Q9BXM7 581 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 DBNDD1Q9H9R9 158 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 SEMA4BQ9NPR2 832 aaPredicted RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 VNN3Q9NY84 501 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 PKD1L3Q7Z443 1732 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 OBSL1O75147 1896 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 DNPH1O43598 174 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 PI15O43692 258 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 UBL3O95164 117 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 RHOCP08134 193 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 YBEYP58557 167 aaPredicted RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 UBE2KP61086 200 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 RIPPLY2Q5TAB7 128 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 WDR88Q6ZMY6 472 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 LRRC52Q8N7C0 313 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 HJURPQ8NCD3 748 aaPredicted RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 GPR156Q8NFN8 814 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 DNERQ8NFT8 737 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 SFXN5Q8TD22 340 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 C4AP0C0L4 1744 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 C4BP0C0L5 1744 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 LNP1A1A4G5 178 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 A8MVM7 634 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 KIAA1324LA8MWY0 1029 aaPredicted RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF254O75437 659 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 PSMD10O75832 226 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 WNT4P56705 351 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 IL13RA1P78552 427 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 CLINT1Q14677 625 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 VAMP3Q15836 100 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 SLC36A3Q495N2 470 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 GRINAQ7Z429 371 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 SIGLECL1Q8N7X8 197 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 OR6K6Q8NGW6 343 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 PROKR1Q8TCW9 393 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 ZFPM2Q8WW38 1151 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 HAS2Q92819 552 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 SLC35C1Q96A29 364 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 CDKN2AIPNLQ96HQ2 116 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 TKTL2Q9H0I9 626 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 TDRD3Q9H7E2 651 aaKnown RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 C1orf123Q9NWV4 160 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 BET1LQ9NYM9 111 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L5A8MUK1 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L15C9J2P7 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L13C9JLJ4 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L11C9JVI0 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L18D6R9N7 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L22D6RA61 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L17D6RBQ6 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L19D6RCP7 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L20D6RJB6 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF623O75123 536 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 SERPINA7P05543 415 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 PFKMP08237 780 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 HSD11B1P28845 292 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 F2RL1P55085 397 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L24Q0WX57 530 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 TCEAL1Q15170 157 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 FSTL4Q6MZW2 842 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 SWSAP1Q6NVH7 229 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L6PQ6QN14 398 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 SLC38A6Q8IZM9 456 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM143Q96AN5 459 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 OR12D3Q9UGF7 316 aa4.65□□□□□ -1.67
CSMD3-201ENST00000297405 FLG2Q5D862 2391 aaPredicted RBP4.65□□□□□ -1.67
CSMD3-201ENST00000297405 hCG_1807616A0A1W2PRN6 198 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ACOD1A6NK06 481 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GSG1L2A8MUP6 293 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SMAD6O43541 496 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GOT2P00505 430 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 THP07101 528 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 THBS1P07996 1170 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TEX30Q5JUR7 227 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 NXPE4Q6UWF7 544 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MON1BQ7L1V2 547 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF627Q7L945 461 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 RNF130Q86XS8 419 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 C15orf54Q8N8G6 183 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 OR1J2Q8NGS2 313 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms