RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CCINQ13939 588 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 PLEKHN1Q494U1 663 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 ZNF789Q5FWF6 425 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 CEACAM19Q7Z692 300 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 TIGD4Q8IY51 512 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 TEX26Q8N6G2 289 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 SAMD12Q8N8I0 201 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 SORCS1Q8WY21 1168 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 AKAP1Q92667 903 aaKnown RBP eCLIP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 LRR1Q96L50 414 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 CNN2Q99439 309 aaKnown RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 TRAPPC13A5PLN9 417 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 CSN2P05814 226 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 STSP08842 583 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 H2BFMP0C1H6 154 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 GKN3PP0CG01 181 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 T-ENOLP0DO92 83 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 GRM7Q14831 915 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 C18orf21Q32NC0 220 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-201ENST00000292478 LARP4Q71RC2 724 aaKnown RBP eCLIP12.18□□□□□ -0.46
PTCD1-201ENST00000292478 PDZD3Q86UT5 571 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 TTC9BQ8N6N2 239 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 C12orf76Q8N812 135 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-201ENST00000292478 ZNF565Q8N9K5 539 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 TOR1AIP2Q8NFQ8 470 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 GTPBP2Q9BX10 602 aaKnown RBP12.18□□□□□ -0.46
PTCD1-201ENST00000292478 SOX17Q9H6I2 414 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-201ENST00000292478 GORASP2Q9H8Y8 452 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 KCNK13Q9HB14 408 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 KIAA0513O60268 411 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 PRSS56P0CW18 603 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 CKMT1AP12532 417 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 LCN1P31025 176 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 NUDT1P36639 197 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 GDPGP1Q6ZNW5 385 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 ARMCX6Q7L4S7 300 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 ZBTB8BQ8NAP8 495 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-201ENST00000292478 OR8K5Q8NH50 307 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 C12orf4Q9NQ89 552 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 RXFP3Q9NSD7 469 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 GDE1Q9NZC3 331 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 NOP16Q9Y3C1 178 aaKnown RBP12.18□□□□□ -0.46
PTCD1-201ENST00000292478 NOX1Q9Y5S8 564 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 CLCA1A8K7I4 914 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 RFPL2O75678 378 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 SPARCP09486 303 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 PROX2Q3B8N5 592 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 TMEM225Q6GV28 225 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 ACVR1CQ8NER5 493 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 OR7G3Q8NG95 312 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 NETO1Q8TDF5 533 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 CHFRQ96EP1 664 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 NELL2Q99435 816 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 ACOT13Q9NPJ3 140 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 TRAPPC6AO75865 159 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 RBBP9O75884 186 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 ANXA3P12429 323 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 PDHA2P29803 388 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 MLLT10P55197 1068 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 LSAMPQ13449 338 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 NDUFAF5Q5TEU4 345 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 FBXO46Q6PJ61 603 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-201ENST00000292478 PLXDC1Q8IUK5 500 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 SPAG16Q8N0X2 631 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 OR5M3Q8NGP4 307 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 SLC22A8Q8TCC7 542 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 MS4A4EQ96PG1 132 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 DEFB126Q9BYW3 111 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 TIGARQ9NQ88 270 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 ABCD2Q9UBJ2 740 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 EPHA6Q9UF33 1036 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 WASF3Q9UPY6 502 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 DHDHQ9UQ10 334 aa12.18□□□□□ -0.46
PTCD1-201ENST00000292478 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 CASC3O15234 703 aaKnown RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 MRPL3P09001 348 aaKnown RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 DDCP20711 480 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 FRKP42685 505 aaPredicted RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 MAGEA2P43356 314 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 HNRNPKP61978 463 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 OR2L8Q8NGY9 312 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 FOXJ1Q92949 421 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 GPR174Q9BXC1 333 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 MYNNQ9NPC7 610 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 DMRT3Q9NQL9 472 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 PPP4R1LQ9P1A2 415 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 ACSL6Q9UKU0 697 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 EMCNQ9ULC0 261 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 EIF1AYO14602 144 aaKnown RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 SCGNO76038 276 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 ADRA1AP35348 466 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 MAP2K3P46734 347 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 AP2S1P53680 142 aaPredicted RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 GXYLT1Q4G148 440 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 ZNF283Q8N7M2 679 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 TESCQ96BS2 214 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 TMEM41AQ96HV5 264 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 NAA11Q9BSU3 229 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms