RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ELF4Q99607 663 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ZFYVE21Q9BQ24 234 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 PSD2Q9BQI7 771 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 WDR12Q9GZL7 423 aaKnown RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ABCG4Q9H172 646 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 SEMA6CQ9H3T2 930 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 EPS8L2Q9H6S3 715 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 PLCXD1Q9NUJ7 323 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 TMEM74BQ9NUR3 256 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ERVK-18Q9QC07 812 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 POMT2Q9UKY4 750 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 EXO1Q9UQ84 846 aaKnown RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 PCDHGA5Q9Y5G8 931 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ZNF292O60281 2723 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 YKT6O15498 198 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ZSCAN9O15535 394 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ANXA8P13928 327 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 DRD2P14416 443 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 DDCP20711 480 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 FMO3P31513 532 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ST13P50502 369 aaKnown RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 MVDP53602 400 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 MAZP56270 477 aaKnown RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ZNF846Q147U1 533 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 SPCS2Q15005 226 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ZNF630Q2M218 657 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 IFI44LQ53G44 452 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 TOR1AIP1Q5JTV8 583 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 C16orf87Q6PH81 154 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ZNF554Q86TJ5 538 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 CHPT1Q8WUD6 406 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 RSC1A1Q92681 617 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 GAL3ST3Q96A11 431 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 TPD52L3Q96J77 140 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ZNF717Q9BY31 904 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 NLNQ9BYT8 704 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 SLC6A16Q9GZN6 736 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ANKHQ9HCJ1 492 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ARHGEF17Q96PE2 2063 aaPredicted RBP15.85■□□□□ 0.13
CPSF4-201ENST00000292476 RHPN2P1A8MT19 583 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 TMEM229AB2RXF0 380 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 PATE3B3GLJ2 98 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 PPM1DO15297 605 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 ERI3O43414 337 aaKnown RBP15.85■□□□□ 0.13
CPSF4-201ENST00000292476 FAM20BO75063 409 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 ZBTB11O95625 1053 aaPredicted RBP15.85■□□□□ 0.13
CPSF4-201ENST00000292476 C1QCP02747 245 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 GBAP04062 536 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 IL3P08700 152 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 SERPINB10P48595 397 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 RPP38P78345 283 aaKnown RBP15.85■□□□□ 0.13
CPSF4-201ENST00000292476 PIGFQ07326 219 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 CSRP2Q16527 193 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 DEFB133Q30KQ1 61 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 PLA2G2CQ5R387 149 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 C6orf132Q5T0Z8 1188 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.85■□□□□ 0.13
CPSF4-201ENST00000292476 FBXO42Q6P3S6 717 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 ABHD17CQ6PCB6 329 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 P2RY8Q86VZ1 359 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 GIPC3Q8TF64 312 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 TM4SF18Q96CE8 201 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 TM4SF19Q96DZ7 209 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 OR2A5Q96R48 311 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 C17orf62Q9BQA9 187 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 RAB33BQ9H082 229 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 RUBCNLQ9H714 662 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 HMG20AQ9NP66 347 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 EXD2Q9NVH0 621 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 EHD3Q9NZN3 535 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 ENOPH1Q9UHY7 261 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 PILRBQ9UKJ0 227 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 PILRAQ9UKJ1 303 aa15.85■□□□□ 0.13
CPSF4-201ENST00000292476 hCG_2014768A0A024R1R8 64 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 A0A0A6YYD5 115 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 NUDT21O43809 227 aaKnown RBP15.84■□□□□ 0.13
CPSF4-201ENST00000292476 LRP3O75074 770 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 GCM2O75603 506 aaPredicted RBP15.84■□□□□ 0.13
CPSF4-201ENST00000292476 KRT75O95678 551 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 MT-ND2P03891 347 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 PROS1P07225 676 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 NUDT7P0C024 238 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 CYP4B1P13584 511 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 HIST1H1TP22492 207 aaPredicted RBP15.84■□□□□ 0.13
CPSF4-201ENST00000292476 KRT20P35900 424 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 CAPZBP47756 277 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 MAPK10P53779 464 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 HYAL2Q12891 473 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 SUZ12Q15022 739 aaKnown RBP15.84■□□□□ 0.13
CPSF4-201ENST00000292476 ZNF385BQ569K4 471 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 CRB2Q5IJ48 1285 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 UBE2UQ5VVX9 321 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 FCRL6Q6DN72 434 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 PRR23CQ6ZRP0 262 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 ABHD13Q7L211 337 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 UBE3DQ7Z6J8 389 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 GALNT10Q86SR1 603 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 SLC15A4Q8N697 577 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 ZNF540Q8NDQ6 660 aa15.84■□□□□ 0.13
CPSF4-201ENST00000292476 CEP76Q8TAP6 659 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms