RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 SUV39H1O43463 412 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 ITGA10O75578 1167 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 BCAS2O75934 225 aaPredicted RBP24.95■■□□□ 1.58
SSU72-201ENST00000291386 TGDSO95455 350 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 EPHA3P29320 983 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 NTSP30990 170 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 HPCAL1P37235 193 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 TUBA3CQ13748 450 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 LTB4RQ15722 352 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 MPEG1Q2M385 716 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 ZNF385BQ569K4 471 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 TUBA3EQ6PEY2 450 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 ADCY4Q8NFM4 1077 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 ACTRT2Q8TDY3 377 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 THAP3Q8WTV1 239 aaPredicted RBP24.95■■□□□ 1.58
SSU72-201ENST00000291386 UTP23Q9BRU9 249 aaKnown RBP24.95■■□□□ 1.58
SSU72-201ENST00000291386 MFRPQ9BY79 579 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 GLIPR2Q9H4G4 154 aa24.95■■□□□ 1.58
SSU72-201ENST00000291386 WDR55Q9H6Y2 383 aaPredicted RBP24.95■■□□□ 1.58
SSU72-201ENST00000291386 PDPK1O15530 556 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 PLOD3O60568 738 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 SORBS2O94875 1100 aaKnown RBP24.94■■□□□ 1.58
SSU72-201ENST00000291386 CD96P40200 585 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 NCBP2P52298 156 aaKnown RBP eCLIP24.94■■□□□ 1.58
SSU72-201ENST00000291386 DIO3P55073 304 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 EBPQ15125 230 aaKnown RBP24.94■■□□□ 1.58
SSU72-201ENST00000291386 PLEKHN1Q494U1 663 aaPredicted RBP24.94■■□□□ 1.58
SSU72-201ENST00000291386 TRMT12Q53H54 448 aaKnown RBP24.94■■□□□ 1.58
SSU72-201ENST00000291386 EPGNQ6UW88 154 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 SLC29A4Q7RTT9 530 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 SPATA19Q7Z5L4 167 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 NATD1Q8N6N6 113 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 Q8NA96 180 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 CATSPER1Q8NEC5 780 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 OR9A2Q8NGT5 310 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 AMDHD1Q96NU7 426 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 SLAMF7Q9NQ25 335 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 SH3BP4Q9P0V3 963 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 CFL2Q9Y281 166 aa24.94■■□□□ 1.58
SSU72-201ENST00000291386 TRAV17A0A0B4J275 112 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 CBX7O95931 251 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 CASRP41180 1078 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 HLCSP50747 726 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 C19orf57Q0VDD7 668 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 ZNF169Q14929 603 aaPredicted RBP24.93■■□□□ 1.58
SSU72-201ENST00000291386 SLC9B1Q4ZJI4 515 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 ANKRD26P1Q6NSI1 321 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 ZNF441Q8N8Z8 693 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 TP53INP1Q96A56 240 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 COQ8BQ96D53 544 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 WWTR1Q9GZV5 400 aa24.93■■□□□ 1.58
SSU72-201ENST00000291386 ACSS1Q9NUB1 689 aaPredicted RBP24.93■■□□□ 1.58
SSU72-201ENST00000291386 HEMK1Q9Y5R4 338 aaPredicted RBP24.93■■□□□ 1.58
SSU72-201ENST00000291386 GOLGA8QA0A0J9YX86 632 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 GOLGA8OA6NCC3 632 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 GOLGA8NF8WBI6 632 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 PLOD2O00469 737 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 PTGER1P34995 402 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 SSR4P51571 173 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 MRPS35P82673 323 aaKnown RBP24.92■■□□□ 1.58
SSU72-201ENST00000291386 MLC1Q15049 377 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 PIGGQ5H8A4 983 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 ZNF468Q5VIY5 522 aaPredicted RBP24.92■■□□□ 1.58
SSU72-201ENST00000291386 RPUSD3Q6P087 351 aaKnown RBP24.92■■□□□ 1.58
SSU72-201ENST00000291386 CAMKMTQ7Z624 323 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 GPALPP1Q8IXQ4 340 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 SLC15A4Q8N697 577 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 MDS2Q8NDY4 140 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 C17orf47Q8NEP4 570 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 CEP70Q8NHQ1 597 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 ZFP28Q8NHY6 868 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 ZBED6CLQ96FA7 236 aaPredicted RBP24.92■■□□□ 1.58
SSU72-201ENST00000291386 RASL10BQ96S79 203 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 PRPF18Q99633 342 aaKnown RBP24.92■■□□□ 1.58
SSU72-201ENST00000291386 LIN28AQ9H9Z2 209 aaKnown RBP24.92■■□□□ 1.58
SSU72-201ENST00000291386 ATAD3AQ9NVI7 634 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 AIG1Q9NVV5 245 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 PCDHGB6Q9Y5F9 930 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 CFAP46Q8IYW2 2715 aa24.92■■□□□ 1.58
SSU72-201ENST00000291386 A0A087WV62 115 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 C2orf92A0A1B0GVN3 265 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 WWP2O00308 870 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 ANKRD28O15084 1053 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 PRAMEF2O60811 474 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 OR2J2O76002 312 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 F10P00742 488 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 ALDOCP09972 364 aaKnown RBP24.91■■□□□ 1.58
SSU72-201ENST00000291386 CYB561P49447 251 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 DUSP8Q13202 625 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 CPTPQ5TA50 214 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 FHL5Q5TD97 284 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 C16orf47Q6ZP98 133 aaPredicted RBP24.91■■□□□ 1.58
SSU72-201ENST00000291386 FAM47EQ6ZV65 393 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 KRTCAP2Q8N6L1 136 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 HORMAD2Q8N7B1 307 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 OR7A2PQ8NGA2 310 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 C16orf52Q8NHV5 167 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 KAT2AQ92830 837 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 ADIPOR1Q96A54 375 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 CIDECQ96AQ7 238 aaPredicted RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms