RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SAMD11Q96NU1 681 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 SLA2Q9H6Q3 261 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 H7BY64 318 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 CA3P07451 260 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 NTSP30990 170 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 DDOSTP39656 456 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 RPL6Q02878 288 aaKnown RBP12.71□□□□□ -0.37
SCAF4-201ENST00000286835 METTL2BQ6P1Q9 378 aaKnown RBP12.71□□□□□ -0.37
SCAF4-201ENST00000286835 FAM92BQ6ZTR7 304 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 DOK4Q8TEW6 326 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 FBLIM1Q8WUP2 373 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 SLC38A5Q8WUX1 472 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 CCDC120Q96HB5 630 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 PRAP1Q96NZ9 151 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 BTBD2Q9BX70 525 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 QRSL1Q9H0R6 528 aaKnown RBP12.71□□□□□ -0.37
SCAF4-201ENST00000286835 EGLN3Q9H6Z9 239 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 SYNDIG1Q9H7V2 258 aa12.71□□□□□ -0.37
SCAF4-201ENST00000286835 PRKYO43930 277 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 ICMTO60725 284 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 ZDHHC11BP0C7U3 371 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 IFNGR2P38484 337 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 NCBP2P52298 156 aaKnown RBP eCLIP12.71□□□□□ -0.382e-7■■■□□ 16.2
SCAF4-201ENST00000286835 CTBP2P56545 445 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 IRF3Q14653 427 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 ZXDCQ2QGD7 858 aaPredicted RBP12.71□□□□□ -0.38
SCAF4-201ENST00000286835 PRAMEF14Q5SWL7 426 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 PRAMEF13Q5VWM6 474 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 SLC30A6Q6NXT4 461 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 PLEKHM3Q6ZWE6 761 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 CBARPQ8N350 705 aaPredicted RBP12.71□□□□□ -0.38
SCAF4-201ENST00000286835 SAMD12Q8N8I0 201 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.38
SCAF4-201ENST00000286835 BARHL1Q9BZE3 327 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 ZCCHC2Q9C0B9 1178 aaKnown RBP12.71□□□□□ -0.38
SCAF4-201ENST00000286835 ABCG5Q9H222 651 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 CXorf36Q9H7Y0 433 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 NCKAP1Q9Y2A7 1128 aa12.71□□□□□ -0.38
SCAF4-201ENST00000286835 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 B4DXG7 233 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 QSOX1O00391 747 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 EEF1E1O43324 174 aaKnown RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 SCN2BO60939 215 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 RHOP08100 348 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 CSF3P09919 207 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 HMGA1P17096 107 aaKnown RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 UQCRC2P22695 453 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 WNT4P56705 351 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 SLC3A1Q07837 685 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 C2orf27AQ580R0 203 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ZDHHC20Q5W0Z9 365 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 BICRALQ6AI39 1079 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 LYPD8Q6UX82 237 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 METTL3Q86U44 580 aaKnown RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 OR4F15Q8NGB8 312 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.7□□□□□ -0.381e-323■■■■■ 61.3
SCAF4-201ENST00000286835 MCCC1Q96RQ3 725 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 TAS2R7Q9NYW3 318 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 EIF3KQ9UBQ5 218 aaKnown RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 FAAHO00519 579 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ALX3O95076 343 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ATF4P18848 351 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 MTNR1AP48039 350 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 RGS8P57771 180 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ABATP80404 500 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 GPR50Q13585 617 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 PODNL1Q6PEZ8 512 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ZNF783Q6ZMS7 281 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 TMEM25Q86YD3 366 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 TP53I13Q8NBR0 393 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 OR4K3Q96R72 315 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 MACROD1Q9BQ69 325 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 CLSTN3Q9BQT9 956 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 SRRQ9GZT4 340 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ENAMQ9NRM1 1142 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 HCFC1R1Q9NWW0 138 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 CLDND1Q9NY35 253 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ENTPD4Q9Y227 616 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 A0A075B6Q4 140 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 GRXCR1A8MXD5 290 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 NFATC1O95644 943 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ETV5P41161 510 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 XCR1P46094 333 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ETV1P50549 477 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 CAP1Q01518 475 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 RHAGQ02094 409 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 FAPQ12884 760 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 FLYWCH1Q4VC44 716 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ABI3BPQ7Z7G0 1075 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 PROKR2Q8NFJ6 384 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ZBED6CLQ96FA7 236 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-201ENST00000286835 MSANTD3Q96H12 275 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 CDCA4Q9BXL8 241 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 ABCG4Q9H172 646 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 LOC105369274A0A096LPK9 316 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
SCAF4-201ENST00000286835 LEFTY2O00292 366 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms