RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 NT5DC2Q9H857 520 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 SEC14L4Q9UDX3 406 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ADAM29Q9UKF5 820 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 FANCMQ8IYD8 2048 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 ANKDD1BA6NHY2 528 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 CAPN5O15484 640 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-201ENST00000277198 PDPK1O15530 556 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 DYRK3O43781 588 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 RPN2P04844 631 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 H1F0P07305 194 aaKnown RBP12.22□□□□□ -0.45
C9orf3-201ENST00000277198 CISD3P0C7P0 127 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 ALOX12P18054 663 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 PSMA1P25786 263 aaKnown RBP12.22□□□□□ -0.45
C9orf3-201ENST00000277198 KCNJ5P48544 419 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 SEPHS1P49903 392 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 MAPK12P53778 367 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 MANFP55145 182 aaKnown RBP12.22□□□□□ -0.45
C9orf3-201ENST00000277198 LIM2P55344 173 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 PCBP4P57723 403 aaKnown RBP12.22□□□□□ -0.45
C9orf3-201ENST00000277198 CYP4F2P78329 520 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 KCNJ8Q15842 424 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 NDUFA9Q16795 377 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 ZNF528Q3MIS6 628 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 TCTN3Q6NUS6 607 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 CD300LDQ6UXZ3 194 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 MAMSTRQ6ZN01 415 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 DCUN1D3Q8IWE4 304 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 PROKR2Q8NFJ6 384 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 HTRA1Q92743 480 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 SLC35B4Q969S0 331 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 TMCO6Q96DC7 493 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 ZBED6CLQ96FA7 236 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-201ENST00000277198 CEP19Q96LK0 163 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 AIF1LQ9BQI0 150 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 MND1Q9BWT6 205 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 OR52A5Q9H2C5 316 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 ACSS1Q9NUB1 689 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-201ENST00000277198 ZSCAN32Q9NX65 697 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 EHD3Q9NZN3 535 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 KLHL3Q9UH77 587 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 SLC27A6Q9Y2P4 619 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 LSM2Q9Y333 95 aaKnown RBP12.22□□□□□ -0.45
C9orf3-201ENST00000277198 SNX8Q9Y5X2 465 aa12.22□□□□□ -0.45
C9orf3-201ENST00000277198 SLC35F4A4IF30 521 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 KPNA3O00505 521 aaPredicted RBP12.21□□□□□ -0.45
C9orf3-201ENST00000277198 PLPP1O14494 284 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 KCNK2O95069 426 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 ELAVL4P26378 380 aaKnown RBP12.21□□□□□ -0.45
C9orf3-201ENST00000277198 HOXD12P35452 270 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 TRA2BP62995 288 aaKnown RBP12.21□□□□□ -0.45
C9orf3-201ENST00000277198 SPHARQ15513 63 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 SSX1Q16384 188 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 ATAD3BQ5T9A4 648 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 RAET1GQ6H3X3 334 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 KIAA1211LQ6NV74 962 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 CASP12Q6UXS9 341 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 PDZD3Q86UT5 571 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 C17orf64Q86WR6 236 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 ZNF547Q8IVP9 402 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 HORMAD2Q8N7B1 307 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 SUMF1Q8NBK3 374 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 TM4SF18Q96CE8 201 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 TMEM19Q96HH6 336 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 OPALINQ96PE5 141 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 CTRCQ99895 268 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 MS4A8Q9BY19 250 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 ZNF717Q9BY31 904 aaPredicted RBP12.21□□□□□ -0.45
C9orf3-201ENST00000277198 WASH6PQ9NQA3 447 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 SACM1LQ9NTJ5 587 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 QPCTLQ9NXS2 382 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 TAS2R7Q9NYW3 318 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 LAMA1P25391 3075 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 KIAA1549LQ6ZVL6 1849 aa12.21□□□□□ -0.45
C9orf3-201ENST00000277198 TRBV4-1A0A0J9YWV2 114 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 PRRT4C9JH25 899 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 KMOO15229 486 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 SPINT1O43278 529 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 HRO43593 1189 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 ENTPD6O75354 484 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 BCHEP06276 602 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 BSGP35613 385 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 KIR2DL1P43626 348 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-201ENST00000277198 CRISP3P54108 245 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 C1DQ13901 141 aaKnown RBP12.21□□□□□ -0.46
C9orf3-201ENST00000277198 CYP27C1Q4G0S4 372 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 SOWAHCQ53LP3 525 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-201ENST00000277198 MFSD4BQ5TF39 518 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 CCBE1Q6UXH8 406 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-201ENST00000277198 ZNF740Q8NDX6 193 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 FAM83FQ8NEG4 500 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-201ENST00000277198 GPR32P1Q8NGA4 272 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 OR9Q1Q8NGQ5 310 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 SMPDL3AQ92484 453 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 WDFY2Q96P53 400 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 FUZQ9BT04 418 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 IER2Q9BTL4 223 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 RNF167Q9H6Y7 350 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 HHATLQ9HCP6 504 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 SLC6A14Q9UN76 642 aa12.21□□□□□ -0.46
C9orf3-201ENST00000277198 ITM2BQ9Y287 266 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms