RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 ACSM5Q6NUN0 579 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 LCTLQ6UWM7 567 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 CAMKK1Q8N5S9 505 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 PARP16Q8N5Y8 322 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 TMIEQ8NEW7 156 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 OR52E1Q8NGJ3 308 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 GOT1L1Q8NHS2 421 aaPredicted RBP15.71■□□□□ 0.11
VPS54-201ENST00000272322 OR5P2Q8WZ92 322 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 TSACCQ96A04 125 aaPredicted RBP15.71■□□□□ 0.11
VPS54-201ENST00000272322 CAMK1GQ96NX5 476 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 GPR34Q9UPC5 381 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 BTN3A3O00478 584 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 VEGFDO43915 354 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 FCMRO60667 390 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 SERPINB7O75635 380 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 DNAJB5O75953 348 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 RUNX3Q13761 415 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 C9orf50Q5SZB4 431 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 UBE2UQ5VVX9 321 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 LHFPL3Q86UP9 236 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 TP53I13Q8NBR0 393 aaPredicted RBP15.71■□□□□ 0.11
VPS54-201ENST00000272322 OR2A1Q8NGT9 310 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 LRR1Q96L50 414 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 TSSK6Q9BXA6 273 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 OSGIN1Q9UJX0 560 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 GPR55Q9Y2T6 319 aaPredicted RBP15.71■□□□□ 0.11
VPS54-201ENST00000272322 A0A1W2PR48 441 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 POM121BA6NF01 834 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 HOXC11O43248 304 aaPredicted RBP15.71■□□□□ 0.11
VPS54-201ENST00000272322 CLEC2LP0C7M8 214 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 PLEKHG7Q6ZR37 379 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 RRM2BQ7LG56 351 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 S100ZQ8WXG8 99 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 FAM83CQ9BQN1 747 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 PLA2G12AQ9BZM1 189 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 ABCB9Q9NP78 766 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 TIGARQ9NQ88 270 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 SLC35C2Q9NQQ7 365 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 INIPQ9NRY2 104 aa15.71■□□□□ 0.11
VPS54-201ENST00000272322 NPIPA5A0A0B4J1W7 369 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 NPIPA7E9PJI5 369 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 FGF19O95750 216 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 CHRM4P08173 479 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 NPIPA8P0DM63 369 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 RPL3P39023 403 aaKnown RBP15.7■□□□□ 0.1
VPS54-201ENST00000272322 SRSF5Q13243 272 aaKnown RBP15.7■□□□□ 0.1
VPS54-201ENST00000272322 TBCEQ15813 527 aaPredicted RBP15.7■□□□□ 0.1
VPS54-201ENST00000272322 ZER1Q7Z7L7 766 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 ZNF614Q8N883 585 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 ACOT4Q8N9L9 421 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 RELTQ969Z4 430 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 NEURL3Q96EH8 262 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 CNRIP1Q96F85 164 aaPredicted RBP15.7■□□□□ 0.1
VPS54-201ENST00000272322 MROQ9BYG7 248 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 ZFR2Q9UPR6 939 aaKnown RBP15.7■□□□□ 0.1
VPS54-201ENST00000272322 CABIN1Q9Y6J0 2220 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 MTCL1Q9Y4B5 1905 aaKnown RBP15.7■□□□□ 0.1
VPS54-201ENST00000272322 MMP11P24347 488 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 SIM1P81133 766 aaPredicted RBP15.7■□□□□ 0.1
VPS54-201ENST00000272322 CHRNEQ04844 493 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 SLC9A5Q14940 896 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 TOR1AIP1Q5JTV8 583 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 AGBL4Q5VU57 503 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 SYT14Q8NB59 555 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 FAM46DQ8NEK8 389 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 SETD7Q8WTS6 366 aaKnown RBP15.7■□□□□ 0.1
VPS54-201ENST00000272322 GATAD2BQ8WXI9 593 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 TP53INP1Q96A56 240 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 AMDHD1Q96NU7 426 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 ZNF607Q96SK3 696 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 TBCCD1Q9NVR7 557 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 SLC13A4Q9UKG4 626 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 SLC27A6Q9Y2P4 619 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 C17orf113A0A1B0GUU1 675 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 LRIT2A6NDA9 550 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 LINC01565O15544 149 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 GABRB1P18505 474 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 FUT1P19526 365 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 ZNF33BQ06732 778 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 SSX1Q16384 188 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 SMARCD3Q6STE5 483 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 USP30Q70CQ3 517 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 CELF2-AS1Q8N7Q2 184 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 PATE1Q8WXA2 126 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 FGF14Q92915 247 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 TBC1D20Q96BZ9 403 aa15.7■□□□□ 0.1
VPS54-201ENST00000272322 METTL15A6NJ78 407 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 LOC110117498-PIK3R3F6TDL0 507 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 SNX4O95219 450 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 HNRNPA1P09651 372 aaKnown RBP eCLIP15.69■□□□□ 0.1
VPS54-201ENST00000272322 CXCR2P25025 360 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 PPP2R1BP30154 601 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 PPP5CP53041 499 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 INSL4Q14641 139 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 DEFB134Q4QY38 66 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 PGBD2Q6P3X8 592 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 DENND6BQ8NEG7 585 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 CXorf40BQ96DE9 158 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 TBX5Q99593 518 aa15.69■□□□□ 0.1
VPS54-201ENST00000272322 TM9SF2Q99805 663 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms