RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 CCR2P41597 374 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 EMP2P54851 167 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 BTBD16Q32M84 506 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 C1orf94Q6P1W5 598 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 MARCH9Q86YJ5 346 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 EDAQ92838 391 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 YTHDF1Q9BYJ9 559 aaKnown RBP13.03□□□□□ -0.32
NPC1-201ENST00000269228 B4GALT7Q9UBV7 327 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 GNG8Q9UK08 70 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 PTBP2Q9UKA9 531 aaKnown RBP13.03□□□□□ -0.32
NPC1-201ENST00000269228 TBX1O43435 398 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 SYNGR4O95473 234 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 ADORA3P0DMS8 318 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 NR0B1P51843 470 aaKnown RBP13.03□□□□□ -0.32
NPC1-201ENST00000269228 CRYZQ08257 329 aaKnown RBP13.03□□□□□ -0.32
NPC1-201ENST00000269228 RGNQ15493 299 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 CCDC80Q76M96 950 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 PDSS2Q86YH6 399 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 CRELD1Q96HD1 420 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 UBXN10Q96LJ8 280 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 ZFP3Q96NJ6 502 aa13.03□□□□□ -0.32
NPC1-201ENST00000269228 FAM25EA8MYX2 175 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 C17orf105B2RV13 164 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 MAGEA3P43357 314 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 SLC36A3Q495N2 470 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 SLC27A4Q6P1M0 643 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 PLET1Q6UQ28 207 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 CHMP1AQ9HD42 196 aaPredicted RBP13.02□□□□□ -0.32
NPC1-201ENST00000269228 PEX16Q9Y5Y5 336 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 ANTXRLA6NF34 631 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 RHCEP18577 417 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 EIF2DP41214 584 aaKnown RBP13.02□□□□□ -0.32
NPC1-201ENST00000269228 TPMTP51580 245 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 PDX1P52945 283 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 CDKL1Q00532 357 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 CHAF1BQ13112 559 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 HSF5Q4G112 596 aaPredicted RBP13.02□□□□□ -0.32
NPC1-201ENST00000269228 ADAMTSL4Q6UY14 1074 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 MSANTD3Q96H12 275 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 TRIM36Q9NQ86 728 aa13.02□□□□□ -0.32
NPC1-201ENST00000269228 ITGA10O75578 1167 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 GGT1P19440 569 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 GSTM2P28161 218 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 GPR143P51810 404 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 TSTQ16762 297 aaKnown RBP13.02□□□□□ -0.33
NPC1-201ENST00000269228 RPS26P11Q5JNZ5 115 aaPredicted RBP13.02□□□□□ -0.33
NPC1-201ENST00000269228 TCEAL6Q6IPX3 200 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 OR51G2Q8NGK0 314 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 HTRA1Q92743 480 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 EGLN2Q96KS0 407 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 TMED9Q9BVK6 235 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 UNC119BA6NIH7 251 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 IGLV3-25P01717 112 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 OR2B6P58173 313 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 ORAI3Q9BRQ5 295 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 MND1Q9BWT6 205 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.33
NPC1-201ENST00000269228 MTHFD2LQ9H903 347 aaPredicted RBP13.02□□□□□ -0.33
NPC1-201ENST00000269228 IL21Q9HBE4 155 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 INTS6Q9UL03 887 aaKnown RBP13.02□□□□□ -0.33
NPC1-201ENST00000269228 SRPK3Q9UPE1 567 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 NOX1Q9Y5S8 564 aa13.02□□□□□ -0.33
NPC1-201ENST00000269228 A0A0G2JPF8 293 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 HNRNPCL3B7ZW38 293 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 INMTO95050 263 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 P04436 131 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 MRPL3P09001 348 aaKnown RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 HNRNPCL4P0DMR1 293 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 TNFRSF1BP20333 461 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 LHCGRP22888 699 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 AFF3P51826 1226 aaKnown RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 DCDC1P59894 354 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 TMEM52BQ4KMG9 183 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 ZSWIM9Q86XI8 627 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 LRRC17Q8N6Y2 441 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 OR6N2Q8NGY6 317 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 KCTD7Q96MP8 289 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 MUS81Q96NY9 551 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 MS4A4EQ96PG1 132 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 FANCFQ9NPI8 374 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 A0A1W2PPL8 197 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 WASHC1A8K0Z3 465 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 NPIPA2E9PIF3 369 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 FAM227AF5H4B4 570 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 NPIPA3F8WFD2 350 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 PRODHO43272 600 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 CLRN1P58418 232 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 WASH2PQ6VEQ5 465 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 USP43Q70EL4 1123 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 GALNTL5Q7Z4T8 443 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 VWA5B2Q8N398 1253 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 LILRA3Q8N6C8 439 aaPredicted RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 OR13H1Q8NG92 308 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 ASB15Q8WXK1 588 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 PITHD1Q9GZP4 211 aaPredicted RBP13.01□□□□□ -0.33
NPC1-201ENST00000269228 PPM1BO75688 479 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 HSD17B1P14061 328 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 IMPA1P29218 277 aa13.01□□□□□ -0.33
NPC1-201ENST00000269228 INHBCP55103 352 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms