RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 OR1L3Q8NH93 324 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 COL26A1Q96A83 441 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 MVB12AQ96EY5 273 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 C16orf58Q96GQ5 468 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 TPD52L3Q96J77 140 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 BCL2L10Q9HD36 194 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 CUTCQ9NTM9 273 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 IRAK4Q9NWZ3 460 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 HCN3Q9P1Z3 774 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 TRPC4Q9UBN4 977 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 C19orf53Q9UNZ5 99 aaPredicted RBP15.35■□□□□ 0.05
TPM1-201ENST00000267996 PADI2Q9Y2J8 665 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 TMEM184BQ9Y519 407 aaPredicted RBP15.35■□□□□ 0.05
TPM1-201ENST00000267996 C5orf58C9J3I9 102 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 DLGAP1O14490 977 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 CTNSO60931 367 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 FABP3P05413 133 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 CKMT1AP12532 417 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 MRPS35P82673 323 aaKnown RBP15.34■□□□□ 0.05
TPM1-201ENST00000267996 PRICKLE4Q2TBC4 344 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 EXOSC6Q5RKV6 272 aaKnown RBP15.34■□□□□ 0.05
TPM1-201ENST00000267996 PRAMEF8Q5VWM4 474 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 PRAMEF7Q5VXH5 474 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 FAM111BQ6SJ93 734 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 ARHGAP22Q7Z5H3 698 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 ARMC8Q8IUR7 673 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 SVOPLQ8N434 492 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 OR4D9Q8NGE8 314 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 XAGE5Q8WWM1 108 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 LZICQ8WZA0 190 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 CTHRC1Q96CG8 243 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 MMABQ96EY8 250 aaPredicted RBP15.34■□□□□ 0.05
TPM1-201ENST00000267996 MS4A4EQ96PG1 132 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 DPYSL5Q9BPU6 564 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 ACTRT3Q9BYD9 372 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 LRRN3Q9H3W5 708 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 DDX18Q9NVP1 670 aaKnown RBP15.34■□□□□ 0.05
TPM1-201ENST00000267996 ATXN7L1Q9ULK2 861 aaPredicted RBP15.34■□□□□ 0.05
TPM1-201ENST00000267996 ABCG2Q9UNQ0 655 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 MRPS33Q9Y291 106 aaKnown RBP15.34■□□□□ 0.05
TPM1-201ENST00000267996 CLDN16Q9Y5I7 305 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 ADAMTS20P59510 1910 aa15.34■□□□□ 0.05
TPM1-201ENST00000267996 TMEM247A6NEH6 219 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 A8MU76 341 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 SLC28A2O43868 658 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 PDE9AO76083 593 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 MFN2O95140 757 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 OPN1SWP03999 348 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 ZNF23P17027 643 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 MAT1AQ00266 395 aaKnown RBP15.33■□□□□ 0.04
TPM1-201ENST00000267996 FUT5Q11128 374 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 SYPL1Q16563 259 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 LPAL2Q16609 132 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 CLPPQ16740 277 aaPredicted RBP15.33■□□□□ 0.04
TPM1-201ENST00000267996 IFI44LQ53G44 452 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 RPS26P11Q5JNZ5 115 aaPredicted RBP15.33■□□□□ 0.04
TPM1-201ENST00000267996 YOD1Q5VVQ6 348 aaPredicted RBP15.33■□□□□ 0.04
TPM1-201ENST00000267996 OR2T5Q6IEZ7 315 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 MFSD12Q6NUT3 480 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 CDC73Q6P1J9 531 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 TBPL2Q6SJ96 375 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 TSEN54Q7Z6J9 526 aaKnown RBP15.33■□□□□ 0.04
TPM1-201ENST00000267996 OR2T29Q8NH02 315 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 ZNF501Q96CX3 271 aaPredicted RBP15.33■□□□□ 0.04
TPM1-201ENST00000267996 PEX11GQ96HA9 241 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 OR7D2Q96RA2 312 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 TREX2Q9BQ50 279 aaPredicted RBP15.33■□□□□ 0.04
TPM1-201ENST00000267996 YIPF4Q9BSR8 244 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 OSBPL11Q9BXB4 747 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 ANKRA2Q9H9E1 313 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 MAT2BQ9NZL9 334 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 GMEB2Q9UKD1 530 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 RAB23Q9ULC3 237 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 PCDHGA5Q9Y5G8 931 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 AP4B1Q9Y6B7 739 aa15.33■□□□□ 0.04
TPM1-201ENST00000267996 EI24O14681 340 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 ZNF749O43361 778 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 RPLP0P05388 317 aaKnown RBP15.32■□□□□ 0.04
TPM1-201ENST00000267996 ZNF883P0CG24 379 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 NR2F1P10589 423 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 CD247P20963 164 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 MPLP40238 635 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 ITGA1P56199 1179 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 GNA13Q14344 377 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 TRMT12Q53H54 448 aaKnown RBP15.32■□□□□ 0.04
TPM1-201ENST00000267996 NHSL2Q5HYW2 709 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 SLC44A2Q8IWA5 706 aaPredicted RBP15.32■□□□□ 0.04
TPM1-201ENST00000267996 OR51Q1Q8NH59 317 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 OR5K1Q8NHB7 308 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 RSPO3Q9BXY4 272 aaPredicted RBP15.32■□□□□ 0.04
TPM1-201ENST00000267996 SERTAD3Q9UJW9 196 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 LIPT1Q9Y234 373 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 GPC6Q9Y625 555 aaPredicted RBP15.32■□□□□ 0.04
TPM1-201ENST00000267996 KCNE3Q9Y6H6 103 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 PRAMEF25A6NGN4 478 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 TGFBR3LH3BV60 316 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 hCG_2039718K7EN88 272 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 GNGT2O14610 69 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 NT5EP21589 574 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 DCTP40126 519 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms