RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 EPHA6Q9UF33 1036 aa8.78□□□□□ -1
SSR3-201ENST00000265044 ATXN7L1Q9ULK2 861 aaPredicted RBP8.78□□□□□ -1
SSR3-201ENST00000265044 SCN8AQ9UQD0 1980 aa8.78□□□□□ -1
SSR3-201ENST00000265044 CCDC88CQ9P219 2028 aa8.78□□□□□ -1
SSR3-201ENST00000265044 A0A0A6YYD5 115 aa8.78□□□□□ -1
SSR3-201ENST00000265044 NPIPB8E9PQR5 432 aa8.78□□□□□ -1
SSR3-201ENST00000265044 VILLO15195 856 aa8.78□□□□□ -1
SSR3-201ENST00000265044 PROM1O43490 865 aa8.78□□□□□ -1
SSR3-201ENST00000265044 GPR75O95800 540 aa8.78□□□□□ -1
SSR3-201ENST00000265044 FESP07332 822 aa8.78□□□□□ -1
SSR3-201ENST00000265044 CPMP14384 443 aa8.78□□□□□ -1
SSR3-201ENST00000265044 TSFMP43897 325 aaKnown RBP8.78□□□□□ -1
SSR3-201ENST00000265044 UGT2B15P54855 530 aa8.78□□□□□ -1
SSR3-201ENST00000265044 COPZ1P61923 177 aa8.78□□□□□ -1
SSR3-201ENST00000265044 RUNX2Q13950 521 aa8.78□□□□□ -1
SSR3-201ENST00000265044 CASP12Q6UXS9 341 aa8.78□□□□□ -1
SSR3-201ENST00000265044 SHISA6Q6ZSJ9 500 aa8.78□□□□□ -1
SSR3-201ENST00000265044 METTL21AQ8WXB1 218 aa8.78□□□□□ -1
SSR3-201ENST00000265044 MUS81Q96NY9 551 aa8.78□□□□□ -1
SSR3-201ENST00000265044 TREX2Q9BQ50 279 aaPredicted RBP8.78□□□□□ -1
SSR3-201ENST00000265044 DUSP23Q9BVJ7 150 aa8.78□□□□□ -1
SSR3-201ENST00000265044 QRSL1Q9H0R6 528 aaKnown RBP8.78□□□□□ -1
SSR3-201ENST00000265044 POMT2Q9UKY4 750 aa8.78□□□□□ -1
SSR3-201ENST00000265044 SZT2Q5T011 3432 aa8.78□□□□□ -1
SSR3-201ENST00000265044 GVINP1Q7Z2Y8 2422 aa8.77□□□□□ -1
SSR3-201ENST00000265044 H6PDO95479 791 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ARAFP10398 606 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ZNF26P17031 533 aaPredicted RBP8.77□□□□□ -1.01
SSR3-201ENST00000265044 CDH15P55291 814 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 PCDH1Q08174 1060 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 TARDBPQ13148 414 aaKnown RBP eCLIP8.77□□□□□ -1.01
SSR3-201ENST00000265044 RNF220Q5VTB9 566 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ZNF730Q6ZMV8 503 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 UBE3DQ7Z6J8 389 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 CDK20Q8IZL9 346 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 PIK3C3Q8NEB9 887 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 FAM81AQ8TBF8 368 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 NEURL3Q96EH8 262 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ACTRT3Q9BYD9 372 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 SLAMF7Q9NQ25 335 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 MRPS2Q9Y399 296 aaKnown RBP8.77□□□□□ -1.01
SSR3-201ENST00000265044 OR2W5A6NFC9 320 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 AGR2O95994 175 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 CTSKP43235 329 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 SLC16A1P53985 500 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 UBE2IP63279 158 aaKnown RBP8.77□□□□□ -1.01
SSR3-201ENST00000265044 SYT16Q17RD7 645 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 CCNJQ5T5M9 372 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 FCRL6Q6DN72 434 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 GPR141Q7Z602 305 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 PTOV1Q86YD1 416 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 RCBTB1Q8NDN9 531 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 OR2I1PQ8NGU4 316 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 TANKQ92844 425 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 SLC38A4Q969I6 547 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 NMD3Q96D46 503 aaKnown RBP8.77□□□□□ -1.01
SSR3-201ENST00000265044 ALPK1Q96QP1 1244 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 CSF3RQ99062 836 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 DGCR6LQ9BY27 220 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 AMBNQ9NP70 447 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 FTSJ1Q9UET6 329 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ENOPH1Q9UHY7 261 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ARID1BQ8NFD5 2236 aaPredicted RBP8.77□□□□□ -1.01
SSR3-201ENST00000265044 TCRBV5S2A0A599 114 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 GTPBP1O00178 669 aaKnown RBP8.77□□□□□ -1.01
SSR3-201ENST00000265044 FRS3O43559 492 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 MITFO75030 526 aaPredicted RBP8.77□□□□□ -1.01
SSR3-201ENST00000265044 H1F0P07305 194 aaKnown RBP8.77□□□□□ -1.01
SSR3-201ENST00000265044 SYPP08247 313 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 IFNGR2P38484 337 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 MAPK10P53779 464 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 GK3PQ14409 553 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 COL19A1Q14993 1142 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ZNF605Q86T29 641 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 CADM2Q8N3J6 435 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ZNF540Q8NDQ6 660 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 NACC2Q96BF6 587 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ELP4Q96EB1 424 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 MENTQ9BUN1 341 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 CD320Q9NPF0 282 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 FGF21Q9NSA1 209 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 LIPT1Q9Y234 373 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 TSC22D4Q9Y3Q8 395 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 ASB4Q9Y574 426 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 RNF215Q9Y6U7 377 aa8.77□□□□□ -1.01
SSR3-201ENST00000265044 LOC100130705A0A1B0GUX0 176 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 CPSF4LA6NMK7 179 aaKnown RBP8.76□□□□□ -1.01
SSR3-201ENST00000265044 M0R3H8 397 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 COQ9O75208 318 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 UGT2B11O75310 529 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 SERPINI2O75830 405 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 GNAO1P09471 354 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 ANXA8P13928 327 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 RPL5P46777 297 aaKnown RBP8.76□□□□□ -1.01
SSR3-201ENST00000265044 LSSP48449 732 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 HSD11B2P80365 405 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 PDE7AQ13946 482 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 NSDHLQ15738 373 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 NIPAL1Q6NVV3 410 aa8.76□□□□□ -1.01
SSR3-201ENST00000265044 CAMKMTQ7Z624 323 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms