RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 PRAMEF8Q5VWM4 474 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 PRAMEF7Q5VXH5 474 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 ZNF770Q6IQ21 691 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 TCTN3Q6NUS6 607 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 CCDC81Q6ZN84 652 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 AHSA2Q719I0 299 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 ANKRD13BQ86YJ7 626 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 CAMKVQ8NCB2 501 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 NUP43Q8NFH3 380 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 RHOXF1Q8NHV9 184 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 ELP4Q96EB1 424 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 ZNF681Q96N22 645 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 PLCXD1Q9NUJ7 323 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 POT1Q9NUX5 634 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 CPNE7Q9UBL6 633 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 ENPP5Q9UJA9 477 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 NDRG2Q9UN36 371 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 SLC9A8Q9Y2E8 581 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 ENTPD2Q9Y5L3 495 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 TRBV4-1A0A0J9YWV2 114 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 FAM221BA6H8Z2 402 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 SHISA7A6NL88 538 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 C2orf74A8MZ97 194 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 C10orf142B7Z368 130 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 NARSO43776 548 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 CTSVO60911 334 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 FADS2O95864 444 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 ADAP00813 363 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 IGLV3-19P01714 112 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 FUT4P22083 530 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 CALRP27797 417 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 TLX1P31314 330 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 MC3RP41968 323 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 DGKEP52429 567 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 CDC42P60953 191 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 TNFRSF17Q02223 184 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 GPAT3Q53EU6 434 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 MLIPQ5VWP3 458 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 FCRL6Q6DN72 434 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 KLHL17Q6TDP4 642 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 ABHD13Q7L211 337 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 SAMD14Q8IZD0 417 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 SLC22A18ASQ8N1D0 253 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 OR9A2Q8NGT5 310 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 ZCCHC10Q8TBK6 192 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 GAB3Q8WWW8 586 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 MYDGFQ969H8 173 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 RERGQ96A58 199 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 FKBP10Q96AY3 582 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 OTUB1Q96FW1 271 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 DHRS1Q96LJ7 313 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 RHNO1Q9BSD3 238 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 RSPO3Q9BXY4 272 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 ACOT13Q9NPJ3 140 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 ACAD8Q9UKU7 415 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 CYP8B1Q9UNU6 501 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 MGAT4BQ9UQ53 548 aa12.18□□□□□ -0.46
SPTLC1-201ENST00000262554 KIR2DS5A0A0G2JLQ3 304 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 A0A0G2JNG1 304 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 A0A1W2PS29 197 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 OR5K4A6NMS3 321 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 TMX2-CTNND1H3BSU7 103 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 KIR2DS3K7RE56 304 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 ASNA1O43681 348 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 B3GALT2O43825 422 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 UGT2B17O75795 530 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 BCL10O95999 233 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 CHRM4P08173 479 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 SMIM10L1P0DMW3 83 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 IGFBP4P22692 258 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 ELAVL4P26378 380 aaKnown RBP12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 CD6P30203 668 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 MASP1P48740 699 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 CRISP1P54107 249 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 RELAQ04206 551 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 FUT5Q11128 374 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 KIR2DS5Q14953 304 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 PTGES3Q15185 160 aaKnown RBP12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 DEFB134Q4QY38 66 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 DGLUCYQ7Z3D6 616 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 LRRC25Q8N386 305 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 TOE1Q96GM8 510 aaKnown RBP12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 SMIM10Q96HG1 83 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 OR7D2Q96RA2 312 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 ZFYVE21Q9BQ24 234 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 BCL7BQ9BQE9 202 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 COPS4Q9BT78 406 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 CALML5Q9NZT1 146 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 PSORS1C1Q9UIG5 152 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 PILRAQ9UKJ1 303 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 DUSP12Q9UNI6 340 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 BRWD1Q9NSI6 2320 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 M0R3H8 397 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 CASC3O15234 703 aaKnown RBP12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 P2RX6O15547 441 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 MPZL2O60487 215 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 ZNF182P17025 639 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 PSMB9P28065 219 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 CTSKP43235 329 aa12.17□□□□□ -0.46
SPTLC1-201ENST00000262554 ST13P50502 369 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms