RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 GLRA1P23415 457 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 GLRA2P23416 452 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 RPA1P27694 616 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 CA8P35219 290 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 HSD17B2P37059 387 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 PITPNBP48739 271 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 PRELPP51888 382 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 SCGB2A2Q13296 93 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 KIAA0141Q14154 515 aaPredicted RBP3.66□□□□□ -1.82
CCDC54-201ENST00000261058 MLF2Q15773 248 aaPredicted RBP3.66□□□□□ -1.82
CCDC54-201ENST00000261058 STK11Q15831 433 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 METAP1DQ6UB28 335 aaPredicted RBP3.66□□□□□ -1.82
CCDC54-201ENST00000261058 AFTPHQ6ULP2 937 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 METTL7BQ6UX53 244 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 TMEM64Q6YI46 380 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 BNIPLQ7Z465 357 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 SYVN1Q86TM6 617 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 C17orf64Q86WR6 236 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 PHC2Q8IXK0 858 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF440Q8IYI8 595 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 THEM5Q8N1Q8 247 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 TRPV3Q8NET8 790 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 THRSPQ92748 146 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 HAS2Q92819 552 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 PIWIL1Q96J94 861 aaKnown RBP3.66□□□□□ -1.82
CCDC54-201ENST00000261058 C18orf12Q96KH6 178 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 ERGIC2Q96RQ1 377 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 TRIM51Q9BSJ1 452 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 THUMPD2Q9BTF0 503 aaKnown RBP3.66□□□□□ -1.82
CCDC54-201ENST00000261058 NTMT1Q9BV86 223 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 POLR1EQ9GZS1 481 aaKnown RBP3.66□□□□□ -1.82
CCDC54-201ENST00000261058 VCPKMTQ9H867 229 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 C3orf14Q9HBI5 128 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 S100A14Q9HCY8 104 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 CENPMQ9NSP4 180 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 SOHLH2Q9NX45 425 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 SPASTQ9UBP0 616 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 TRIM10Q9UDY6 481 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 TEX264Q9Y6I9 313 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 U3KQV3 271 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 A0A1W2PPR1 153 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 CASC3O15234 703 aaKnown RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 IDH1O75874 414 aaKnown RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 GAS8-AS1O95177 125 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 DIRAS3O95661 229 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 PDGFBP01127 241 aaPredicted RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 MMP10P09238 476 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 NUDT17P0C025 328 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 CT45A8P0DMV1 189 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 CT45A9P0DMV2 189 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 AOC1P19801 751 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 DNAJB1P25685 340 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 PKLRP30613 574 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 FCGR2BP31994 310 aaPredicted RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 FCGR2CP31995 323 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 DHPSP49366 369 aaPredicted RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 FHITP49789 147 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 BLVRAP53004 296 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 ELAVL2Q12926 359 aaKnown RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 LCP2Q13094 533 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 PDE7AQ13946 482 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 GK2Q14410 553 aaPredicted RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 DPYSL2Q16555 572 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 STX1AQ16623 288 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 IFI44LQ53G44 452 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 TAF1BQ53T94 588 aaPredicted RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 CT45A2Q5DJT8 189 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 ATAD3BQ5T9A4 648 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 AADACL4Q5VUY2 407 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 LYPLAL1Q5VWZ2 237 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 SNRNP48Q6IEG0 339 aaKnown RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 TAS2R42Q7RTR8 314 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 DHX29Q7Z478 1369 aaKnown RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 ZNF410Q86VK4 478 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 SERPINA12Q8IW75 414 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 ZCCHC7Q8N3Z6 543 aaKnown RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 OR13C2Q8NGS9 318 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 GPR148Q8TDV2 347 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 GANCQ8TET4 914 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 LIPHQ8WWY8 451 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 SAMD8Q96LT4 415 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 UBAC1Q9BSL1 405 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 OSBPL10Q9BXB5 764 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 NSRP1Q9H0G5 558 aaKnown RBP3.65□□□□□ -1.83
CCDC54-201ENST00000261058 EHD1Q9H4M9 534 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 COQ10BQ9H8M1 238 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 LRRC40Q9H9A6 602 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 SYTL2Q9HCH5 934 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 NUDT4Q9NZJ9 180 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 CCDC180Q9P1Z9 1646 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 ANKMY1Q9P2S6 941 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 RSPH14Q9UHP6 348 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 PSME2Q9UL46 239 aa3.65□□□□□ -1.83
CCDC54-201ENST00000261058 WDR19Q8NEZ3 1342 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 A0A0J9YWU9 116 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 GOLGA6L7A0A1B0GV03 622 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 FAM230AA0A1W2PPH8 454 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 INPP4BO15327 924 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 BUB1O43683 1085 aa3.64□□□□□ -1.83
CCDC54-201ENST00000261058 GPRIN2O60269 458 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms