RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ACOT4Q8N9L9 421 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SH3KBP1Q96B97 665 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 SIKE1Q9BRV8 207 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 MYO9AB2RTY4 2548 aa5.21□□□□□ -1.58
TOPBP1-201ENST00000260810 FTCDNL1E5RQL4 147 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 M0R082 166 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ARPC2O15144 300 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SC5DO75845 299 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 THEGLP0DJG4 465 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 CBLP22681 906 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ITGADQ13349 1161 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 AASDHQ4L235 1098 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SYTL3Q4VX76 610 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 METTL2BQ6P1Q9 378 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 TMEM26Q6ZUK4 368 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 GALNT13Q8IUC8 556 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF786Q8N393 782 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF655Q8N720 491 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 FAM47BQ8NA70 645 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 CCDC197Q8NCU1 140 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ADCY4Q8NFM4 1077 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 OR6T1Q8NGN1 323 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 REPS1Q96D71 796 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SIPA1Q96FS4 1042 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SH3GL3Q99963 347 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ERVMER34-1Q9H9K5 563 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC25A19Q9HC21 320 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 RIC8BQ9NVN3 520 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 TAS2R13Q9NYV9 303 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 DHCR7Q9UBM7 475 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 CCDC163A0A0D9SF12 145 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SUPT7LO94864 414 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SNAP29O95721 258 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 RFPL3SP0C7P2 107 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 CD27P26842 260 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ASMTP46597 345 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC48A1Q6P1K1 146 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 PTP4A1Q93096 173 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 FAM167BQ9BTA0 163 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 HGH1Q9BTY7 390 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ADGRE3Q9BY15 652 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 GORASP2Q9H8Y8 452 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 EXD2Q9NVH0 621 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 PCDHGA8Q9Y5G5 932 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 PCDHGA2Q9Y5H1 932 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 TMEM221A6NGB7 291 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 M0R296 226 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SUPT3HO75486 399 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 IFNA14P01570 189 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF888P0CJ79 500 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ARHGEF7Q14155 803 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 PAQR6Q6TCH4 344 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ZER1Q7Z7L7 766 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 FBXW8Q8N3Y1 598 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 OR4E2Q8NGC2 313 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 OR5AK3PQ8NH89 298 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SMPDL3BQ92485 455 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 RGP1Q92546 391 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ELP4Q96EB1 424 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SOX7Q9BT81 388 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 TCRBV16S1A1N1A0A5B0 115 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 C1QTNF9BB2RNN3 333 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 AP3D1O14617 1153 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 STK16O75716 305 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 ENO1P06733 434 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 CCL7P80098 99 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 RHDQ02161 417 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC36A3Q495N2 470 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 KDM4DQ6B0I6 523 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 PRSS45Q7RTY3 260 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 OR9A4Q8NGU2 314 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 SENP5Q96HI0 755 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 UCK1Q9HA47 277 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 DKK4Q9UBT3 224 aa5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 GPC6Q9Y625 555 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-201ENST00000260810 CCDC160A6NGH7 325 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF860A6NHJ4 632 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 GNGT2O14610 69 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 UGDHO60701 494 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 GUCY1B2O75343 617 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 CRTAMO95727 393 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ATP1B1P05026 303 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 CYP2A6P11509 494 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 HIST1H1TP22492 207 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 GNPDA1P46926 289 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 OMPP47874 163 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC7A2P52569 658 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 RPS4XP62701 263 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PIGFQ07326 219 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SPEM2Q0P670 501 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PCOLCEQ15113 449 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 RGNQ15493 299 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 EOGTQ5NDL2 527 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ANKS6Q68DC2 871 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF776Q68DI1 518 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 MDGA2Q7Z553 956 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 GLRX5Q86SX6 157 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 DENND6BQ8NEG7 585 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms