RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 DPM1O60762 260 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 TIA1P31483 386 aaKnown RBP eCLIP15.64■□□□□ 0.099e-7■■■■□ 24
SDCBP-201ENST00000260130 RPL14P50914 215 aaKnown RBP15.64■□□□□ 0.09
SDCBP-201ENST00000260130 MMEL1Q495T6 779 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 IGFL2Q6UWQ7 119 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 IGFL3Q6UXB1 125 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 TEX19Q8NA77 164 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 HIPK4Q8NE63 616 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 B3GNT7Q8NFL0 401 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 RP9Q8TA86 221 aaKnown RBP15.64■□□□□ 0.09
SDCBP-201ENST00000260130 ELP5Q8TE02 316 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 TWIST2Q8WVJ9 160 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 TM9SF4Q92544 642 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 DAZLQ92904 295 aaKnown RBP15.64■□□□□ 0.09
SDCBP-201ENST00000260130 RBM18Q96H35 190 aaKnown RBP15.64■□□□□ 0.09
SDCBP-201ENST00000260130 OR52B2Q96RD2 323 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 LMF1Q96S06 567 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 PCDHA9Q9Y5H5 950 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 CFAP46Q8IYW2 2715 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 C1orf226A1L170 272 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 LINC00032P0C843 101 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 TNNI3P19429 210 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 PRPH2P23942 346 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 PIK3R1P27986 724 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 KLRB1Q12918 225 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 H3F3CQ6NXT2 135 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 LINC00696Q6ZRV3 163 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 Q6ZSR9 355 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 DDIASQ8IXT1 998 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 PTPMT1Q8WUK0 201 aaPredicted RBP15.63■□□□□ 0.09
SDCBP-201ENST00000260130 METTL2AQ96IZ6 378 aaKnown RBP15.63■□□□□ 0.09
SDCBP-201ENST00000260130 PPIEQ9UNP9 301 aaKnown RBP15.63■□□□□ 0.09
SDCBP-201ENST00000260130 NPIPB8E9PQR5 432 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 H3BNX3 289 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 SEC22BO75396 215 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 ANXA4P09525 319 aaPredicted RBP15.63■□□□□ 0.09
SDCBP-201ENST00000260130 SOX11P35716 441 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 STT3AP46977 705 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 NUDT2P50583 147 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 SH3BGRP55822 239 aaPredicted RBP15.63■□□□□ 0.09
SDCBP-201ENST00000260130 TAS2R50P59544 299 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 MFAP5Q13361 173 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 DYNC1I2Q13409 638 aaKnown RBP15.63■□□□□ 0.09
SDCBP-201ENST00000260130 OGFRL1Q5TC84 451 aaPredicted RBP15.63■□□□□ 0.09
SDCBP-201ENST00000260130 B3GNTL1Q67FW5 361 aaPredicted RBP15.63■□□□□ 0.09
SDCBP-201ENST00000260130 DGAT2Q96PD7 388 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 FAIM2Q9BWQ8 316 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 EPS8L2Q9H6S3 715 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 C1orf109Q9NX04 203 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 TEKT2Q9UIF3 430 aa15.63■□□□□ 0.09
SDCBP-201ENST00000260130 C17orf105B2RV13 164 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 B8ZZF3 427 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 PIP5K1BO14986 540 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 GSTT1P30711 240 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 GPR143P51810 404 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 C19orf57Q0VDD7 668 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 KIAA0040Q15053 153 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 GRAMD1BQ3KR37 738 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 ZFP1Q6P2D0 407 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 PQLC1Q8N2U9 271 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 ZADH2Q8N4Q0 377 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 CPSF7Q8N684 471 aaKnown RBP15.62■□□□□ 0.09
SDCBP-201ENST00000260130 APCDD1LQ8NCL9 501 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 OR4K14Q8NGD5 310 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 OR2T11Q8NH01 316 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 OR14A16Q8NHC5 309 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 C16orf78Q8WTQ4 265 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 PPWD1Q96BP3 646 aaKnown RBP15.62■□□□□ 0.09
SDCBP-201ENST00000260130 EBPLQ9BY08 206 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 Q9H521 79 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 LRTM1Q9HBL6 345 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 CES1P1Q9UKY3 287 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 DLGAP4Q9Y2H0 992 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 DTNAQ9Y4J8 743 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 AIM2O14862 343 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 COX7A2P14406 83 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 PLIN5Q00G26 463 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 CYLC2Q14093 348 aaPredicted RBP15.62■□□□□ 0.09
SDCBP-201ENST00000260130 PDK3Q15120 406 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 CNPY1Q3B7I2 92 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 SLC48A1Q6P1K1 146 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 BNC2Q6ZN30 1099 aaPredicted RBP15.62■□□□□ 0.09
SDCBP-201ENST00000260130 SNX32Q86XE0 403 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 RBMXL3Q8N7X1 1067 aaKnown RBP15.62■□□□□ 0.09
SDCBP-201ENST00000260130 MORN4Q8NDC4 146 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 CATSPER1Q8NEC5 780 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 PELOQ9BRX2 385 aaKnown RBP15.62■□□□□ 0.09
SDCBP-201ENST00000260130 VCX3AQ9NNX9 186 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 STMN3Q9NZ72 180 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 ANAPC2Q9UJX6 822 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 PSME2Q9UL46 239 aa15.62■□□□□ 0.09
SDCBP-201ENST00000260130 SPTA1P02549 2419 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 GOLGA8QA0A0J9YX86 632 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 GOLGA8OA6NCC3 632 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 GOLGA8NF8WBI6 632 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 IL3P08700 152 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 SLC35E2P0CK97 266 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 DRD2P14416 443 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 GSTM5P46439 218 aa15.61■□□□□ 0.09
SDCBP-201ENST00000260130 CD97P48960 835 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms