RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 UBE3AQ05086 875 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 LGALSLQ3ZCW2 172 aaPredicted RBP10.9□□□□□ -0.66
TROAP-201ENST00000257909 PLEKHS1Q5SXH7 462 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 RAET1GQ6H3X3 334 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 TCTN3Q6NUS6 607 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 CD300LDQ6UXZ3 194 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 UNC5DQ6UXZ4 953 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 C16orf59Q7L2K0 433 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 PLEKHH3Q7Z736 793 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 MARCH9Q86YJ5 346 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 IQCF1Q8N6M8 205 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 CELF5Q8N6W0 485 aaKnown RBP10.9□□□□□ -0.66
TROAP-201ENST00000257909 ARIH2OSQ8N7S6 290 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 GPR156Q8NFN8 814 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 PPCDCQ96CD2 204 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 RNFT2Q96EX2 444 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 NLNQ9BYT8 704 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 GSX2Q9BZM3 304 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 DPAGT1Q9H3H5 408 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 CACNG2Q9Y698 323 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 KIAA1671Q9BY89 1806 aa10.9□□□□□ -0.66
TROAP-201ENST00000257909 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.9□□□□□ -0.67
TROAP-201ENST00000257909 A8MUA0 341 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 C5orf58C9J3I9 102 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 TOR1AO14656 332 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 KHNYNO15037 678 aaKnown RBP10.9□□□□□ -0.67
TROAP-201ENST00000257909 LRRTM2O43300 516 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 PRKACAP17612 351 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 ELK1P19419 428 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 CD52P31358 61 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 GIPRP48546 466 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 EFNB1P98172 346 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 BCL2L1Q07817 233 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 PDE7AQ13946 482 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 GINS1Q14691 196 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 NTRK2Q16620 822 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 CTXN3Q4LDR2 81 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 ASB18Q6ZVZ8 466 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 LRRC28Q86X40 367 aaPredicted RBP10.9□□□□□ -0.67
TROAP-201ENST00000257909 OR7G3Q8NG95 312 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 OR5AK3PQ8NH89 298 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 SMG7Q92540 1137 aaKnown RBP10.9□□□□□ -0.67
TROAP-201ENST00000257909 FGF11Q92914 225 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 PMEPA1Q969W9 287 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 PDXPQ96GD0 296 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 RBP7Q96R05 134 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 NUDT15Q9NV35 164 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 UCKL1Q9NWZ5 548 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 RDH8Q9NYR8 311 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 CLCA2Q9UQC9 943 aa10.9□□□□□ -0.67
TROAP-201ENST00000257909 MTMR11A4FU01 709 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 FAM170BA6NMN3 283 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 TMEM189-UBE2V1I3L0A0 370 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 GABRPO00591 440 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 KPNA5O15131 536 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 CASC3O15234 703 aaKnown RBP10.89□□□□□ -0.67
TROAP-201ENST00000257909 CHST10O43529 356 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 SH3BGRLO75368 114 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 NME6O75414 186 aaPredicted RBP10.89□□□□□ -0.67
TROAP-201ENST00000257909 NCR1O76036 304 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 PAHP00439 452 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 FURINP09958 794 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 ZP3P21754 424 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 GALP22466 123 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 AHCYP23526 432 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 SOAT1P35610 550 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 SMSP52788 366 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 B4GALNT1Q00973 533 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 MINDY4Q4G0A6 757 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 KIAA1324Q6UXG2 1013 aaKnown RBP10.89□□□□□ -0.67
TROAP-201ENST00000257909 SLC36A4Q6YBV0 504 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 VRK3Q8IV63 474 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 LINC00471Q8N535 108 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 OR6C4Q8NGE1 309 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 OR5M3Q8NGP4 307 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 CIDECQ96AQ7 238 aaPredicted RBP10.89□□□□□ -0.67
TROAP-201ENST00000257909 PLD4Q96BZ4 506 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 SEPT5Q99719 369 aaPredicted RBP10.89□□□□□ -0.67
TROAP-201ENST00000257909 ERVMER34-1Q9H9K5 563 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 CYSLTR2Q9NS75 346 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 KIF25Q9UIL4 384 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 CBLCQ9ULV8 474 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 CSNK1G3Q9Y6M4 447 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 TRAV6A0A075B6T7 132 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 A0A1W2PRG6 482 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 SYN3O14994 580 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 CELF2O95319 508 aaKnown RBP10.89□□□□□ -0.67
TROAP-201ENST00000257909 MPC2O95563 127 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 PEPDP12955 493 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 DNASE1P24855 282 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 RBMS1P29558 406 aaKnown RBP10.89□□□□□ -0.67
TROAP-201ENST00000257909 BMP8BP34820 402 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 MTNR1AP48039 350 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 EPHA5P54756 1037 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 DCDC1P59894 354 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 CDK5Q00535 292 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 PUDPQ08623 228 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 CAMK2DQ13557 499 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 LDLRAD1Q5T700 205 aa10.89□□□□□ -0.67
TROAP-201ENST00000257909 TMEM81Q6P7N7 255 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms