RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ZNF517Q6ZMY9 492 aaPredicted RBP18.06■□□□□ 0.48
PTPRE-201ENST00000254667 DGLUCYQ7Z3D6 616 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 HS3ST5Q8IZT8 346 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 OR5AR1Q8NGP9 310 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 MOCOSQ96EN8 888 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 WDR77Q9BQA1 342 aaPredicted RBP18.06■□□□□ 0.48
PTPRE-201ENST00000254667 ZNF69Q9UC07 566 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 RGPD5Q99666 1765 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 KIR2DS5A0A0G2JLQ3 304 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 A0A0G2JNG1 304 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 KIR2DS3K7RE56 304 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 CLIC3O95833 236 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 CCNOP22674 350 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 MLLT10P55197 1068 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 RPS26P62854 115 aaKnown RBP18.06■□□□□ 0.48
PTPRE-201ENST00000254667 KIR2DS5Q14953 304 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 NSDHLQ15738 373 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 ODF4Q2M2E3 257 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 ALDH16A1Q8IZ83 802 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 CLECL1Q8IZS7 167 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 LRRC46Q96FV0 321 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 MS4A4EQ96PG1 132 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 NANSQ9NR45 359 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 ENAMQ9NRM1 1142 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 PLD2O14939 933 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 MRPL3P09001 348 aaKnown RBP18.06■□□□□ 0.48
PTPRE-201ENST00000254667 IL4RP24394 825 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 NNATQ16517 81 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 PIGGQ5H8A4 983 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 CNIH3Q8TBE1 160 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 SLC7A6OSQ96CW6 309 aaPredicted RBP18.06■□□□□ 0.48
PTPRE-201ENST00000254667 HHIPL1Q96JK4 782 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 ACSL6Q9UKU0 697 aa18.06■□□□□ 0.48
PTPRE-201ENST00000254667 KAT6AQ92794 2004 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 SLITRK5O94991 958 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 RETP07949 1114 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 PRKCAP17252 672 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 FAM26DQ5JW98 314 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 LRRN1Q6UXK5 716 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 MTMR10Q9NXD2 777 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 TMA7Q9Y2S6 64 aaKnown RBP18.05■□□□□ 0.48
PTPRE-201ENST00000254667 ACTL7AQ9Y615 435 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 LETMD1Q6P1Q0 360 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 LIPIQ6XZB0 460 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 MYRFLQ96LU7 910 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 LMAN1LQ9HAT1 526 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 PREBQ9HCU5 417 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 NUAK1O60285 661 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 ERCC1P07992 297 aaPredicted RBP18.05■□□□□ 0.48
PTPRE-201ENST00000254667 BAIAP2L2Q6UXY1 529 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 HSD11B1LQ7Z5J1 315 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 CNTN4Q8IWV2 1026 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 NEIL3Q8TAT5 605 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 THAP6Q8TBB0 222 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 DMRTB1Q96MA1 342 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 TRAPPC13A5PLN9 417 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 FANCGO15287 622 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 JRKO75564 520 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 S100A6P06703 90 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 SOX9P48436 509 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 HNRNPA0Q13151 305 aaKnown RBP18.05■□□□□ 0.48
PTPRE-201ENST00000254667 ZNF789Q5FWF6 425 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 GTF2IRD2BQ6EKJ0 949 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 C1orf94Q6P1W5 598 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 FIGNL1Q6PIW4 674 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 TAS1R1Q7RTX1 841 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 GTF2IRD2Q86UP8 949 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 TEX26Q8N6G2 289 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 CDRT4Q8N9R6 151 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 ENPP4Q9Y6X5 453 aa18.05■□□□□ 0.48
PTPRE-201ENST00000254667 A0A0J9YY10 115 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 SH3D21A4FU49 640 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 GSTT2P0CG29 244 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 FOSL2P15408 326 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 AK4P27144 223 aaPredicted RBP18.04■□□□□ 0.48
PTPRE-201ENST00000254667 SGCAQ16586 387 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 LARP4Q71RC2 724 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTPRE-201ENST00000254667 MAMDC2Q7Z304 686 aaPredicted RBP18.04■□□□□ 0.48
PTPRE-201ENST00000254667 FGF13Q92913 245 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 OR1F2PQ96R84 312 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 FAM118AQ9NWS6 357 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 MT-ND2P03891 347 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 RBMS1P29558 406 aaKnown RBP18.04■□□□□ 0.48
PTPRE-201ENST00000254667 HERV-K104P61576 105 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 MFSD13AQ14CX5 517 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 PKDCCQ504Y2 493 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 OR4N5Q8IXE1 308 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 RPLP0P6Q8NHW5 317 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 RXFP3Q9NSD7 469 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 ADAMTS6Q9UKP5 1117 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 SLC7A11Q9UPY5 501 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 RNASET2O00584 256 aaKnown RBP18.04■□□□□ 0.48
PTPRE-201ENST00000254667 MAZP56270 477 aaKnown RBP18.04■□□□□ 0.48
PTPRE-201ENST00000254667 RGNQ15493 299 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 SPIN3Q5JUX0 258 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 UNQ6126/PRO20091Q6UXV3 157 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 PARS2Q7L3T8 475 aaKnown RBP18.04■□□□□ 0.48
PTPRE-201ENST00000254667 OR2L2Q8NH16 312 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 NTMT1Q9BV86 223 aa18.04■□□□□ 0.48
PTPRE-201ENST00000254667 DMRT3Q9NQL9 472 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms