RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 C11orf16Q9NQ32 467 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 SEMA3GQ9NS98 782 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 PLCXD1Q9NUJ7 323 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 FKBP14Q9NWM8 211 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 RHBDL2Q9NX52 303 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 P2RX2Q9UBL9 471 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 PMF1-BGLAPU3KQ54 211 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 M0R082 166 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 M0R3G1 203 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 TPST2O60704 377 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 MRPS14O60783 128 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 COQ9O75208 318 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 NR2F1P10589 423 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 FUT5Q11128 374 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 NR1D2Q14995 579 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 MLC1Q15049 377 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 ENPP7Q6UWV6 458 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 TMEM107Q6UX40 140 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 MAFAQ8NHW3 353 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 FAIM2Q9BWQ8 316 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 ITPAQ9BY32 194 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 NECTIN3Q9NQS3 549 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 DMDP11532 3685 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 BTN3A3O00478 584 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 NADKO95544 446 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 DDX5P17844 614 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 NTSP30990 170 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 CNR2P34972 360 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 CRISP1P54107 249 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 CRISP3P54108 245 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 CSNK2BP67870 215 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 PIN1Q13526 163 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 LASP1Q14847 261 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 DEPDC4Q8N2C3 294 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 MYDGFQ969H8 173 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 TSACCQ96A04 125 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 C16orf58Q96GQ5 468 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 SH3YL1Q96HL8 342 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 OR2M4Q96R27 311 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 PCDHGA4Q9Y5G9 962 aa17.64■□□□□ 0.41
PDLIM4-201ENST00000253754 ZAR1LA6NP61 321 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 OR10H3O60404 316 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 PDE9AO76083 593 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 CHRM4P08173 479 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 GSTM5P46439 218 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 MLIPQ5VWP3 458 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 MRM1Q6IN84 353 aaKnown RBP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 FRMPD2BQ6IN97 320 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 WDR53Q7Z5U6 358 aaPredicted RBP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 DENND6BQ8NEG7 585 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 B3GNT7Q8NFL0 401 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 OR2L5Q8NG80 312 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 ZNF607Q96SK3 696 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 QRSL1Q9H0R6 528 aaKnown RBP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 EHD3Q9NZN3 535 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 KCNE3Q9Y6H6 103 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 GON4LQ3T8J9 2241 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 WDR87Q6ZQQ6 2873 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 EPPINO95925 133 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 PTHP01270 115 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 HMGN2P05204 90 aaKnown RBP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 CHRNB1P11230 501 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 LSM11P83369 360 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 ST3GAL4Q11206 333 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 SFSWAPQ12872 951 aaKnown RBP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 TBCEQ15813 527 aaPredicted RBP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 Q6ZNX1 250 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 IGFN1Q86VF2 1251 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 STX19Q8N4C7 294 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 TMCO5AQ8N6Q1 288 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 KCT2Q8NC54 265 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 DYNC2LI1Q8TCX1 351 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 TRUB1Q8WWH5 349 aaKnown RBP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 LCN9Q8WX39 176 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 LGALS12Q96DT0 336 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 SCARF2Q96GP6 870 aaPredicted RBP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 BTBD2Q9BX70 525 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 CTPS2Q9NRF8 586 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 REV1Q9UBZ9 1251 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 TMCC3Q9ULS5 477 aa17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 GPC6Q9Y625 555 aaPredicted RBP17.63■□□□□ 0.41
PDLIM4-201ENST00000253754 NINQ8N4C6 2090 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 ARRDC5A6NEK1 342 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 H1F0P07305 194 aaKnown RBP17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 CHRM5P08912 532 aaPredicted RBP17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 CDC42P60953 191 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 ABATP80404 500 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 TIGD6Q17RP2 521 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 TRIM73Q86UV7 250 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 AMIGO1Q86WK6 493 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 SLC7A13Q8TCU3 470 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 IL4I1Q96RQ9 567 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 MAPKAP1Q9BPZ7 522 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 BCL7BQ9BQE9 202 aa17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 ZBTB20Q9HC78 741 aaPredicted RBP17.62■□□□□ 0.41
PDLIM4-201ENST00000253754 TMEM247A6NEH6 219 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 ADORA3P0DMS8 318 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 CMPK1P30085 196 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 AHRP35869 848 aa17.61■□□□□ 0.41
PDLIM4-201ENST00000253754 RANBP1P43487 201 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms