RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SPSB2Q99619 263 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 TINF2Q9BSI4 451 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 NPDC1Q9NQX5 325 aaPredicted RBP12.37□□□□□ -0.43
MSH2-201ENST00000233146 CYSLTR2Q9NS75 346 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 TAS2R3Q9NYW6 316 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 NCF1BA6NI72 391 aaPredicted RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 NCF1CA8MVU1 366 aaPredicted RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 LRRTM2O43300 516 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 EEF1E1O43324 174 aaKnown RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 ICAM1P05362 532 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 NDUFB7P17568 137 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 RAB5BP61020 215 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 SNRPGP62308 76 aaKnown RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 SV2CQ496J9 727 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 GCNT6Q5T4J0 391 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 C3orf33Q6P1S2 294 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 HHIPL2Q6UWX4 724 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 ABHD15Q6UXT9 468 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 GSG1LQ6UXU4 331 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 RNF113BQ8IZP6 322 aaKnown RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 FAM46DQ8NEK8 389 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 OR56B4Q8NH76 319 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 PIH1D2Q8WWB5 315 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 KAT2AQ92830 837 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 IL4I1Q96RQ9 567 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 FAM124BQ9H5Z6 455 aaPredicted RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 DHCR7Q9UBM7 475 aaKnown RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 EIF2B4Q9UI10 523 aaKnown RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 PAK4O96013 591 aaPredicted RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 FOLR2P14207 255 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 HOXB8P17481 243 aaPredicted RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 CCR6P51684 374 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 EFNA5P52803 228 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 GUCA2BQ16661 112 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 TMEM201Q5SNT2 666 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 CD200R1LQ6Q8B3 271 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 DEF8Q6ZN54 512 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 PTOV1Q86YD1 416 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 KLBQ86Z14 1044 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 SPAG16Q8N0X2 631 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 RPLP0P6Q8NHW5 317 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 SLC6A18Q96N87 628 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 PDCD2LQ9BRP1 358 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 KLRG2A4D1S0 409 aaPredicted RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 SLC9B1P1A6NJY1 282 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 AGAP14A8MT82 685 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 STMND1H3BQB6 276 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 PHYHO14832 338 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 STX11O75558 287 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 C1QCP02747 245 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 RFX3P48380 749 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 SEC61A1P61619 476 aaKnown RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 ACY1Q03154 408 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 TPBGQ13641 420 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 SSX2Q16385 188 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 CIR1Q86X95 450 aaPredicted RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 ARMC10Q8N2F6 343 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 CPNE4Q96A23 557 aaPredicted RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 ORAI1Q96D31 301 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 MRPL38Q96DV4 380 aaKnown RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 OR4K3Q96R72 315 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 NPY6RQ99463 290 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 FSD1LQ9BXM9 530 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 QRSL1Q9H0R6 528 aaKnown RBP12.36□□□□□ -0.43
MSH2-201ENST00000233146 NTMQ9P121 344 aa12.36□□□□□ -0.43
MSH2-201ENST00000233146 ZNF646O15015 1829 aaPredicted RBP12.35□□□□□ -0.43
MSH2-201ENST00000233146 C9orf170A2RU37 121 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 ICOSLGO75144 302 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 AQP8O94778 261 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 HEXAP06865 529 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 GIPP09681 153 aaPredicted RBP12.35□□□□□ -0.43
MSH2-201ENST00000233146 NPR2P20594 1047 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 CRYBA2P53672 197 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 SP4Q02446 784 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 Q6ZTK2 550 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 ZNF707Q96C28 371 aaPredicted RBP12.35□□□□□ -0.43
MSH2-201ENST00000233146 C14orf144Q96I85 54 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 NEU1Q99519 415 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 DUSP16Q9BY84 665 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 PIGVQ9NUD9 493 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 WBP1LQ9NX94 342 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 RPS6KB2Q9UBS0 482 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 RAI2Q9Y5P3 530 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 OR51F1A6NGY5 319 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 TMEM229AB2RXF0 380 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 I6L893 689 aaPredicted RBP12.35□□□□□ -0.43
MSH2-201ENST00000233146 M0QYT0 321 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 CCL22O00626 93 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 PRAMEF2O60811 474 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 RD3LP0DJH9 198 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 GAAP10253 952 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 ZNF8P17098 575 aaPredicted RBP12.35□□□□□ -0.43
MSH2-201ENST00000233146 SLC3A1Q07837 685 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 HTR4Q13639 388 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 SMCO1Q147U7 214 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 ZSWIM7Q19AV6 140 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 ATAT1Q5SQI0 421 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 MPZL3Q6UWV2 235 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 MILR1Q7Z6M3 343 aa12.35□□□□□ -0.43
MSH2-201ENST00000233146 GPR135Q8IZ08 494 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms