RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 HSDL2Q6YN16 418 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 SIAH3Q8IW03 269 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 GALNT11Q8NCW6 608 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 NUBPLQ8TB37 319 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 RIT1Q92963 219 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 UTP23Q9BRU9 249 aaKnown RBP12.7□□□□□ -0.38
VEGFA-201ENST00000230480 TACO1Q9BSH4 297 aaKnown RBP12.7□□□□□ -0.38
VEGFA-201ENST00000230480 LRTM1Q9HBL6 345 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 KLHL1Q9NR64 748 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 C1orf109Q9NX04 203 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 LRFN1Q9P244 771 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 ERVK-11Q9UQG0 969 aa12.7□□□□□ -0.38
VEGFA-201ENST00000230480 SETXQ7Z333 2677 aaKnown RBP12.7□□□□□ -0.38
VEGFA-201ENST00000230480 ATP6AP2A0A1C7CYW4 349 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 SLC28A1O00337 649 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 NME2P1O60361 137 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 SHOX2O60902 331 aaPredicted RBP12.69□□□□□ -0.38
VEGFA-201ENST00000230480 SNNO75324 88 aaPredicted RBP12.69□□□□□ -0.38
VEGFA-201ENST00000230480 SEC22BO75396 215 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 ERAL1O75616 437 aaKnown RBP12.69□□□□□ -0.38
VEGFA-201ENST00000230480 ATP6AP2O75787 350 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 ZWINTO95229 277 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 DDCP20711 480 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 NME2P22392 152 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 EMDP50402 254 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 ABCE1P61221 599 aaKnown RBP12.69□□□□□ -0.38
VEGFA-201ENST00000230480 MRPS35P82673 323 aaKnown RBP12.69□□□□□ -0.38
VEGFA-201ENST00000230480 PLIN5Q00G26 463 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 C2orf80Q0P641 193 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 ASPHQ12797 758 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 PDE7AQ13946 482 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 EXOSC7Q15024 291 aaKnown RBP12.69□□□□□ -0.38
VEGFA-201ENST00000230480 SPDYAQ5MJ70 313 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 C6orf136Q5SQH8 315 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 DESI1Q6ICB0 168 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 TMEM64Q6YI46 380 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 GALNTL5Q7Z4T8 443 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 TICAM1Q8IUC6 712 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 CCDC116Q8IYX3 515 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 METTL2AQ96IZ6 378 aaKnown RBP12.69□□□□□ -0.38
VEGFA-201ENST00000230480 FRMD6Q96NE9 622 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 CNPPD1Q9BV87 410 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 WWTR1Q9GZV5 400 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.69□□□□□ -0.383e-8■□□□□ 11
VEGFA-201ENST00000230480 WDR41Q9HAD4 459 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 PRM3Q9NNZ6 103 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 KCNK9Q9NPC2 374 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 SLC35C2Q9NQQ7 365 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 PNPOQ9NVS9 261 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 TEKT2Q9UIF3 430 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 UTS2RQ9UKP6 389 aa12.69□□□□□ -0.38
VEGFA-201ENST00000230480 YARS2Q9Y2Z4 477 aaKnown RBP12.69□□□□□ -0.38
VEGFA-201ENST00000230480 GNG14A0A1W2PPG7 69 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 SYNDIG1LA6NDD5 238 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 CDK2AP1O14519 115 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 ZNF195O14628 629 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 ADAM10O14672 748 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 ZNHIT1O43257 154 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 TBX19O60806 448 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 MYZAPP0CAP1 466 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 BCKDHAP12694 445 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 PCSK2P16519 638 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 CSNK2A2P19784 350 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-201ENST00000230480 GPX3P22352 226 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 SLC1A6P48664 564 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 ALDH9A1P49189 494 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 ZNF763Q0D2J5 394 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 NR6A1Q15406 480 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 AGBL2Q5U5Z8 902 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 ANKRD26P1Q6NSI1 321 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 MAVSQ7Z434 540 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 FGD2Q7Z6J4 655 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 CROCCP2Q86T23 111 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 SULF2Q8IWU5 870 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 GALNT12Q8IXK2 581 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 ANKRD42Q8N9B4 389 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 OR7G2Q8NG99 324 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 C16orf52Q8NHV5 167 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 ZNF675Q8TD23 568 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 EXOSC8Q96B26 276 aaKnown RBP12.68□□□□□ -0.38
VEGFA-201ENST00000230480 KLHL29Q96CT2 875 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 OR10A5Q9H207 317 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 EHD3Q9NZN3 535 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 HRH3Q9Y5N1 445 aa12.68□□□□□ -0.38
VEGFA-201ENST00000230480 TMEM114B3SHH9 223 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 OR10H2O60403 315 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 GUCY1B2O75343 617 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 SKAP2O75563 359 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 SLC25A12O75746 678 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 PSMG1O95456 288 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 NT5EP21589 574 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 FRKP42685 505 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 CYB561P49447 251 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 SSR4P51571 173 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 OC90Q02509 493 aaPredicted RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 FOXO1Q12778 655 aa12.67□□□□□ -0.38
VEGFA-201ENST00000230480 EIF2S3LQ2VIR3 472 aaKnown RBP12.67□□□□□ -0.38
VEGFA-201ENST00000230480 IL20RBQ6UXL0 311 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms