RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 DNASE1P24855 282 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DDTP30046 118 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 PCGF2P35227 344 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 OMPP47874 163 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 ZNF81P51508 661 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 PKIAP61925 76 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SLC6A3Q01959 620 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DHODHQ02127 395 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SEMA5AQ13591 1074 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SF1Q15637 639 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 KRTCAP3Q53RY4 240 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 FAM74A1Q5RGS3 127 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 CD276Q5ZPR3 534 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SLC27A1Q6PCB7 646 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 AFTPHQ6ULP2 937 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 LCLAT1Q6UWP7 414 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 TMPRSS11AQ6ZMR5 421 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 MBOAT1Q6ZNC8 495 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DDX53Q86TM3 631 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 PTRH1Q86Y79 214 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 C10orf107Q8IVU9 208 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 NAXDQ8IW45 347 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 PRSS58Q8IYP2 241 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 CPEB3Q8NE35 698 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 OR9A2Q8NGT5 310 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SCARB1Q8WTV0 552 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 PCNPQ8WW12 178 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 PRR14Q9BWN1 585 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 KATNBL1Q9H079 304 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 ATXN3LQ9H3M9 355 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 REEP4Q9H6H4 257 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SMURF1Q9HCE7 757 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SLAMF7Q9NQ25 335 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 ZFP57Q9NU63 452 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 MIOSQ9NXC5 875 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SLC39A10Q9ULF5 831 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 PADI2Q9Y2J8 665 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 GOLT1BQ9Y3E0 138 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 A0A1B0GW55 424 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 MEX3AA1L020 520 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 WDR27A2RRH5 827 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 E9PI62 339 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 NPIPB8E9PQR5 432 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 UPK1AO00322 258 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 PRMT5O14744 637 aaPredicted RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 PQBP1O60828 265 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 GPR32O75388 356 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 CNOT4O95628 575 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 IGHV2-5P01817 119 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 CYBBP04839 570 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DUX4L2P0CJ85 424 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DUX4L3P0CJ86 424 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DUX4L4P0CJ87 422 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DUX4L5P0CJ88 424 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DUX4L6P0CJ89 424 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DUX4L7P0CJ90 424 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 CSH1P0DML2 217 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 CSH2P0DML3 217 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 CYP4B1P13584 511 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 EFNA1P20827 205 aaPredicted RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 HTRA4P83105 476 aaPredicted RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 ELAVL2Q12926 359 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 MAD2L1Q13257 205 aaPredicted RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 CAMK2DQ13557 499 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 RBMS2Q15434 407 aaKnown RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 PTCHD3Q3KNS1 767 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 PPM1JQ5JR12 505 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 N4BP2L1Q5TBK1 243 aaPredicted RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 LCN1P1Q5VSP4 162 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 ABHD17CQ6PCB6 329 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 ZNF783Q6ZMS7 281 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DNAJB7Q7Z6W7 309 aaPredicted RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 ADHFE1Q8IWW8 467 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 RIMKLAQ8IXN7 391 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 PELI3Q8N2H9 469 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 ZNF383Q8NA42 475 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 ANKRD52Q8NB46 1076 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SETD9Q8NE22 299 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 SLC35F5Q8WV83 523 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 RHBDF1Q96CC6 855 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 BSCL2Q96G97 398 aaPredicted RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 SCMH1Q96GD3 660 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 TMEM209Q96SK2 561 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 HTATIP2Q9BUP3 242 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 ABHD16BQ9H3Z7 469 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 VAPAQ9P0L0 249 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 DUX4Q9UBX2 424 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 POMT2Q9UKY4 750 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 ERVW-1Q9UQF0 538 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 CDYLQ9Y232 598 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 FIS1Q9Y3D6 152 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 RAP2CQ9Y3L5 183 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 LOC100130705A0A1B0GUX0 176 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 C7orf66A4D0T2 115 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 MCIDASD6RGH6 385 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 MKRN2OSH3BPM6 223 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 M0QZK8 103 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 BCAT2O15382 392 aaPredicted RBP5.42□□□□□ -1.54
RFX4-201ENST00000229387 MFSD11O43934 449 aa5.42□□□□□ -1.54
RFX4-201ENST00000229387 PRKCGP05129 697 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms