RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 CYP27C1Q4G0S4 372 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 ATAD3BQ5T9A4 648 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 USP53Q70EK8 1073 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 OR13F1Q8NGS4 319 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 OR9A2Q8NGT5 310 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 CNIH3Q8TBE1 160 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 ISOC1Q96CN7 298 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 MPP4Q96JB8 637 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 DOK1Q99704 481 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 ACTRT3Q9BYD9 372 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 TPSD1Q9BZJ3 242 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 SEMA6CQ9H3T2 930 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 ACAD8Q9UKU7 415 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 POMT2Q9UKY4 750 aa16.6■□□□□ 0.25
GCDH-201ENST00000222214 CCDC88CQ9P219 2028 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 LOC105369274A0A096LPK9 316 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 LOC102723532A0A0G2JNH3 316 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 PRAMEF27A3QJZ7 478 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 NOL3O60936 208 aaKnown RBP16.59■□□□□ 0.25
GCDH-201ENST00000222214 CSF2P04141 144 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 IFI6P09912 130 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 CD38P28907 300 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 SLC5A2P31639 672 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 GGT2P36268 569 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 MC3RP41968 323 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 DYNC1I2Q13409 638 aaKnown RBP16.59■□□□□ 0.25
GCDH-201ENST00000222214 RUNX2Q13950 521 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 UBXN2BQ14CS0 331 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 CCDC85BQ15834 202 aaPredicted RBP16.59■□□□□ 0.25
GCDH-201ENST00000222214 ZNF750Q32MQ0 723 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 FRMPD2BQ6IN97 320 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 B3GNT8Q7Z7M8 397 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 GKN2Q86XP6 184 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 OR4N4Q8N0Y3 316 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 DEPDC4Q8N2C3 294 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 IPCEF1Q8WWN9 437 aaPredicted RBP16.59■□□□□ 0.25
GCDH-201ENST00000222214 RLN3Q8WXF3 142 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 DUSP21Q9H596 190 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 TRIM45Q9H8W5 580 aaPredicted RBP16.59■□□□□ 0.25
GCDH-201ENST00000222214 UCK1Q9HA47 277 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 EVA1BQ9NVM1 165 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 C2orf42Q9NWW7 574 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 PTGFRNQ9P2B2 879 aa16.59■□□□□ 0.25
GCDH-201ENST00000222214 SEC14L2O76054 403 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 NME1P15531 152 aaKnown RBP16.58■□□□□ 0.25
GCDH-201ENST00000222214 ITIH1P19827 911 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 CBLP22681 906 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 LSSP48449 732 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 XKP51811 444 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 STARD6P59095 220 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 FZD5Q13467 585 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 C1orf61Q13536 156 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 LEXMQ3ZCV2 418 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 COL13A1Q5TAT6 717 aaPredicted RBP16.58■□□□□ 0.25
GCDH-201ENST00000222214 XAF1Q6GPH4 301 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 TCTN3Q6NUS6 607 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 NR4A3Q92570 626 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 MS4A4EQ96PG1 132 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 TRNT1Q96Q11 434 aaKnown RBP16.58■□□□□ 0.25
GCDH-201ENST00000222214 OR7D2Q96RA2 312 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 PINK1Q9BXM7 581 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 FANCEQ9HB96 536 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 WNT16Q9UBV4 365 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 PCDHGA6Q9Y5G7 932 aa16.58■□□□□ 0.25
GCDH-201ENST00000222214 FAAHO00519 579 aa16.58■□□□□ 0.24
GCDH-201ENST00000222214 PCDH17O14917 1159 aa16.58■□□□□ 0.24
GCDH-201ENST00000222214 ADAP00813 363 aa16.58■□□□□ 0.24
GCDH-201ENST00000222214 H1F0P07305 194 aaKnown RBP16.58■□□□□ 0.24
GCDH-201ENST00000222214 ALPPL2P10696 532 aa16.58■□□□□ 0.24
GCDH-201ENST00000222214 FASLGP48023 281 aa16.58■□□□□ 0.24
GCDH-201ENST00000222214 RACK1P63244 317 aaKnown RBP16.58■□□□□ 0.24
GCDH-201ENST00000222214 GANABQ14697 944 aaKnown RBP16.58■□□□□ 0.24
GCDH-201ENST00000222214 GPAT3Q53EU6 434 aa16.58■□□□□ 0.24
GCDH-201ENST00000222214 LINC00471Q8N535 108 aa16.58■□□□□ 0.24
GCDH-201ENST00000222214 CSNK1A1LQ8N752 337 aa16.58■□□□□ 0.24
GCDH-201ENST00000222214 CCDC3Q9BQI4 270 aa16.58■□□□□ 0.24
GCDH-201ENST00000222214 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.58■□□□□ 0.24
GCDH-201ENST00000222214 NMNAT1Q9HAN9 279 aaPredicted RBP16.58■□□□□ 0.24
GCDH-201ENST00000222214 SPTBN5Q9NRC6 3674 aaKnown RBP16.57■□□□□ 0.24
GCDH-201ENST00000222214 B4DGG1 531 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 PTGES3LE9PB15 166 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 SYT5O00445 386 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 FFAR1O14842 300 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 EIF2S1P05198 315 aaKnown RBP16.57■□□□□ 0.24
GCDH-201ENST00000222214 CHRM4P08173 479 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 HTR1AP08908 422 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 PVRP15151 417 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 EPHA2P29317 976 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 MAN2A2P49641 1150 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 TMBIM6P55061 237 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 SLC35A2P78381 396 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 DCST1Q5T197 706 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.57■□□□□ 0.24
GCDH-201ENST00000222214 GPR153Q6NV75 609 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 P3H2Q8IVL5 708 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 SDR16C5Q8N3Y7 309 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 FAM160A2Q8N612 972 aaPredicted RBP16.57■□□□□ 0.24
GCDH-201ENST00000222214 FRMD1Q8N878 549 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 NIPSNAP1Q9BPW8 284 aa16.57■□□□□ 0.24
GCDH-201ENST00000222214 KLHL25Q9H0H3 589 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms