RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 BCL2L15Q5TBC7 163 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 RAB12Q6IQ22 244 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 DCDC5Q6ZRR9 648 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 CWH43Q9H720 699 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 TM9SF3Q9HD45 589 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 CD320Q9NPF0 282 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 SARDHQ9UL12 918 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 POMPQ9Y244 141 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 AP1M2Q9Y6Q5 423 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 SLIT2O94813 1529 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 A0A1W2PP18 115 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 CDC14CA4D256 554 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 OXSR1O95747 527 aaPredicted RBP10.07□□□□□ -0.8
TRPS1-201ENST00000220888 LCKP06239 509 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 GSK3BP49841 420 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 HSD17B12Q53GQ0 312 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 SLC27A4Q6P1M0 643 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 KDELC1Q6UW63 502 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 BARD1Q99728 777 aaKnown RBP10.07□□□□□ -0.8
TRPS1-201ENST00000220888 FBXL3Q9UKT7 428 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 ABCG2Q9UNQ0 655 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 KIF20BQ96Q89 1820 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 C17orf105B2RV13 164 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 TMEM233B4DJY2 109 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 ICAM2P13598 275 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 SPINT3P49223 89 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 ARHGAP11AQ6P4F7 1023 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 TRIM46Q7Z4K8 759 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 TRIM73Q86UV7 250 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 GRAMD2AQ8IUY3 354 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 SPAG16Q8N0X2 631 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 OR2T4Q8NH00 348 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 FGF13Q92913 245 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 ZNF382Q96SR6 550 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 RTP3Q9BQQ7 232 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 ULBP3Q9BZM4 244 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 ENKD1Q9H0I2 346 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 ACTR10Q9NZ32 417 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 SIX4Q9UIU6 781 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 NAALAD2Q9Y3Q0 740 aa10.07□□□□□ -0.8
TRPS1-201ENST00000220888 SULT2B1O00204 365 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 FAAHO00519 579 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 PEX2P28328 305 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 PBX1P40424 430 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 MVKQ03426 396 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 POU4F2Q12837 409 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 SLC18B1Q6NT16 456 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 KIAA0907Q7Z7F0 614 aaPredicted RBP10.06□□□□□ -0.8
TRPS1-201ENST00000220888 OR9A2Q8NGT5 310 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 STOML3Q8TAV4 291 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 PEX13Q92968 403 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 S100PBPQ96BU1 408 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 ECHDC3Q96DC8 303 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 SERINC2Q96SA4 455 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 SLC6A7Q99884 636 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 ITPAQ9BY32 194 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 LRIT1Q9P2V4 623 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 KLHL21Q9UJP4 597 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 K7ERQ8 282 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 CDRT1O95170 752 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 MAGEA3P43357 314 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 EEF1A1P68104 462 aaKnown RBP10.06□□□□□ -0.8
TRPS1-201ENST00000220888 ZC3H10Q96K80 434 aaKnown RBP10.06□□□□□ -0.8
TRPS1-201ENST00000220888 ZBTB26Q9HCK0 441 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 SIX2Q9NPC8 291 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 HEBP1Q9NRV9 189 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 KCND1Q9NSA2 647 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 HOXD8P13378 290 aaPredicted RBP10.06□□□□□ -0.8
TRPS1-201ENST00000220888 ZNF12P17014 697 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 KCNJ11Q14654 390 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 PAPD5Q8NDF8 572 aaKnown RBP10.06□□□□□ -0.8
TRPS1-201ENST00000220888 ASB9Q96DX5 294 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 IMP4Q96G21 291 aaKnown RBP10.06□□□□□ -0.8
TRPS1-201ENST00000220888 LINC00597Q9H2U6 94 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 ZDHHC2Q9UIJ5 367 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 PCDHGA8Q9Y5G5 932 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 TCRBV7S3A2A0A539 114 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 CD53P19397 219 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 MAGEA8P43361 318 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 OR1E2P47887 323 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 ACADVLP49748 655 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 TMBIM6P55061 237 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 TAS2R38P59533 333 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 TRAM1Q15629 374 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 SMYD5Q6GMV2 418 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 SHISA6Q6ZSJ9 500 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 PDSS2Q86YH6 399 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 MINDY2Q8NBR6 621 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 FER1L6-AS2Q96M78 137 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 KCNA7Q96RP8 456 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 EBF4Q9BQW3 602 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 FAM117AQ9C073 453 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 TWSG1Q9GZX9 223 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 COQ3Q9NZJ6 369 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 KIAA1210Q9ULL0 1709 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 SLC22A1O15245 554 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 YKT6O15498 198 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 NPPAP01160 153 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 GKN3PP0CG01 181 aa10.06□□□□□ -0.8
TRPS1-201ENST00000220888 AGTR2P50052 363 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms