RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 MIXL1Q9H2W2 232 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 DPEP2Q9H4A9 486 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 TBC1D14Q9P2M4 693 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 SPIN1Q9Y657 262 aaPredicted RBP16.33■□□□□ 0.2
USB1-201ENST00000219281 NINQ8N4C6 2090 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 A0A1W2PQL4 384 aaPredicted RBP16.33■□□□□ 0.2
USB1-201ENST00000219281 SMIM30A4D0T7 59 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 FAM172BPA6NC97 362 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 APOL3O95236 402 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 MSL3P1P0C860 447 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 MYOGP15173 224 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 DDOSTP39656 456 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 MRPS15P82914 257 aaKnown RBP16.33■□□□□ 0.2
USB1-201ENST00000219281 SCN1BQ07699 218 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 HYAL2Q12891 473 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 MADCAM1Q13477 382 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 TBRG1Q3YBR2 411 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 GLYR1Q49A26 553 aaPredicted RBP16.33■□□□□ 0.2
USB1-201ENST00000219281 RTL10Q7L3V2 364 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 ZER1Q7Z7L7 766 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 C17orf64Q86WR6 236 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 GALNT6Q8NCL4 622 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 OR2L2Q8NH16 312 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 CREB3L4Q8TEY5 395 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 RASSF5Q8WWW0 418 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 OTUB1Q96FW1 271 aaPredicted RBP16.33■□□□□ 0.2
USB1-201ENST00000219281 SNX18Q96RF0 628 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 FNDC11Q9BVV2 318 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 OR52A5Q9H2C5 316 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 OR51I1Q9H343 314 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 PLEKHB1Q9UF11 243 aaPredicted RBP16.33■□□□□ 0.2
USB1-201ENST00000219281 TMEM98Q9Y2Y6 226 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 YARS2Q9Y2Z4 477 aaKnown RBP16.33■□□□□ 0.2
USB1-201ENST00000219281 C17orf113A0A1B0GUU1 675 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 CENPXA8MT69 81 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 AGRPO00253 132 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 LRRTM2O43300 516 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 TMPRSS11DO60235 418 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 IL1AP01583 271 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 FHP07954 510 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 CPEP16870 476 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 CEBPBP17676 345 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 KELP23276 732 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 ALDH6A1Q02252 535 aaKnown RBP16.32■□□□□ 0.2
USB1-201ENST00000219281 SLAMF1Q13291 335 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 IQCHQ86VS3 1027 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 IL17RCQ8NAC3 791 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 DIRAS2Q96HU8 199 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 LINC00615Q96LM1 132 aaPredicted RBP16.32■□□□□ 0.2
USB1-201ENST00000219281 GPA33Q99795 319 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 RHBGQ9H310 441 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 KCNK12Q9HB15 430 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 LHX9Q9NQ69 397 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 CTPS2Q9NRF8 586 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 TEX10Q9NXF1 929 aaPredicted RBP16.32■□□□□ 0.2
USB1-201ENST00000219281 TRPC4Q9UBN4 977 aa16.32■□□□□ 0.2
USB1-201ENST00000219281 FABP12A6NFH5 140 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 LZTS3O60299 673 aaPredicted RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 TBX19O60806 448 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 EPHX1P07099 455 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 TSPAN19P0C672 248 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 NR2F1P10589 423 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 GIPRP48546 466 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 OR2G6Q5TZ20 316 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 MEX3DQ86XN8 651 aaKnown RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 TBC1D19Q8N5T2 526 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 NATD1Q8N6N6 113 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 OR4K5Q8NGD3 323 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 ZNF707Q96C28 371 aaPredicted RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 ZBED6CLQ96FA7 236 aaPredicted RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 AIF1LQ9BQI0 150 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 P2RX2Q9UBL9 471 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 TESQ9UGI8 421 aaKnown RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 SNX7Q9UNH6 387 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 A0A0G2JN53 185 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 A0A1W2PRQ8 180 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 H7BY64 318 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 HOXC11O43248 304 aaPredicted RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 TMCC2O75069 709 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 CSF3P09919 207 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 C6P13671 934 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 PSMB5P28074 263 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 SDC2P34741 201 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 FRKP42685 505 aaPredicted RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 RPS25P62851 125 aaKnown RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 RACK1P63244 317 aaKnown RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 SNAPC1Q16533 368 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 XKRXQ6PP77 449 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 C11orf96Q7Z7L8 435 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 AMER3Q8N944 861 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 FAM181AQ8N9Y4 354 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 ARRDC3Q96B67 414 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 C1GALT1C1Q96EU7 318 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 MSLNLQ96KJ4 702 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 PRAP1Q96NZ9 151 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 SLC22A4Q9H015 551 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 C11orf54Q9H0W9 315 aaPredicted RBP16.31■□□□□ 0.2
USB1-201ENST00000219281 WDR70Q9NW82 654 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 MARK1Q9P0L2 795 aa16.31■□□□□ 0.2
USB1-201ENST00000219281 BOLA1Q9Y3E2 137 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms