RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 FUT5Q11128 374 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 C1orf61Q13536 156 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 TCTN3Q6NUS6 607 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 NUP43Q8NFH3 380 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 DHRS1Q96LJ7 313 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 ALPK1Q96QP1 1244 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 NODALQ96S42 347 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 NIPSNAP1Q9BPW8 284 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 LRRC61Q9BV99 259 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 ZNF556Q9HAH1 456 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 LYRM4Q9HD34 91 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 NTMQ9P121 344 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 PRUNE2Q8WUY3 3088 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 SEC14L2O76054 403 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 LRRC25Q8N386 305 aaPredicted RBP27.94■■■□□ 2.06
PABPN1-201ENST00000216727 PARP8Q8N3A8 854 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 FAM46DQ8NEK8 389 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 DUSP21Q9H596 190 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 CDC14AQ9UNH5 594 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 SNX5Q9Y5X3 404 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 SLC22A7Q9Y694 548 aa27.94■■■□□ 2.06
PABPN1-201ENST00000216727 A0A0G2JPF8 293 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 HNRNPCL2B2RXH8 293 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 HNRNPCL3B7ZW38 293 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 XPNPEP2O43895 674 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 CHRM4P08173 479 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 HNRNPCL4P0DMR1 293 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 CBLP22681 906 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 GPR153Q6NV75 609 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 OR4K14Q8NGD5 310 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 OR9Q2Q8NGE9 314 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 C16orf58Q96GQ5 468 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 YIPF4Q9BSR8 244 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 DNAAF2Q9NVR5 837 aaKnown RBP27.93■■■□□ 2.06
PABPN1-201ENST00000216727 SCN3BQ9NY72 215 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 ENOPH1Q9UHY7 261 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 ACAD8Q9UKU7 415 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 PCDHGB1Q9Y5G3 927 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 SCN3AQ9NY46 2000 aa27.93■■■□□ 2.06
PABPN1-201ENST00000216727 PTGES3LE9PB15 166 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 CD27P26842 260 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 GGT2P36268 569 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 MAN2A2P49641 1150 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 NMNAT1Q9HAN9 279 aaPredicted RBP27.92■■■□□ 2.06
PABPN1-201ENST00000216727 SEMA7AO75326 666 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 FMO3P31513 532 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 XKP51811 444 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 SLC35A2P78381 396 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 GTF2IRD2BQ6EKJ0 949 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 LAIR1Q6GTX8 287 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 ZNF770Q6IQ21 691 aaPredicted RBP27.92■■■□□ 2.06
PABPN1-201ENST00000216727 GTF2IRD2Q86UP8 949 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 TAGAPQ8N103 731 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 OR7D2Q96RA2 312 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 SLC24A3Q9HC58 644 aa27.92■■■□□ 2.06
PABPN1-201ENST00000216727 GIMAP1-GIMAP5A0A087WTJ2 511 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 PCDHGA12O60330 932 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 FUT4P22083 530 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 USP53Q70EK8 1073 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 ENTHD1Q8IYW4 607 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 C12orf43Q96C57 262 aaKnown RBP27.91■■■□□ 2.06
PABPN1-201ENST00000216727 GIMAP5Q96F15 307 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 CSF3RQ99062 836 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 TMEM9Q9P0T7 183 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 RHCGQ9UBD6 479 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 POMT2Q9UKY4 750 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 LIPT1Q9Y234 373 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 METTL12A8MUP2 240 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 CSNK2BP67870 215 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 LTB4RQ15722 352 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 GPR107Q5VW38 600 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 CWF19L1Q69YN2 538 aaKnown RBP27.91■■■□□ 2.06
PABPN1-201ENST00000216727 OR4D11Q8NGI4 311 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 OTUB1Q96FW1 271 aaPredicted RBP27.91■■■□□ 2.06
PABPN1-201ENST00000216727 PCED1AQ9H1Q7 454 aa27.91■■■□□ 2.06
PABPN1-201ENST00000216727 MRPS14O60783 128 aaKnown RBP27.9■■■□□ 2.06
PABPN1-201ENST00000216727 CSF2P04141 144 aa27.9■■■□□ 2.06
PABPN1-201ENST00000216727 ITIH1P19827 911 aa27.9■■■□□ 2.06
PABPN1-201ENST00000216727 UBXN2BQ14CS0 331 aa27.9■■■□□ 2.06
PABPN1-201ENST00000216727 KAT2AQ92830 837 aa27.9■■■□□ 2.06
PABPN1-201ENST00000216727 ACTRT3Q9BYD9 372 aa27.9■■■□□ 2.06
PABPN1-201ENST00000216727 SEMA6CQ9H3T2 930 aa27.9■■■□□ 2.06
PABPN1-201ENST00000216727 MRPS2Q9Y399 296 aaKnown RBP27.9■■■□□ 2.06
PABPN1-201ENST00000216727 CASC3O15234 703 aaKnown RBP27.89■■■□□ 2.06
PABPN1-201ENST00000216727 WBP4O75554 376 aaKnown RBP27.89■■■□□ 2.06
PABPN1-201ENST00000216727 EIF2S1P05198 315 aaKnown RBP27.89■■■□□ 2.06
PABPN1-201ENST00000216727 PCMT1P22061 227 aa27.89■■■□□ 2.06
PABPN1-201ENST00000216727 SMIM11AP58511 58 aa27.89■■■□□ 2.06
PABPN1-201ENST00000216727 PIGFQ07326 219 aa27.89■■■□□ 2.06
PABPN1-201ENST00000216727 ARMC6Q6NXE6 501 aa27.89■■■□□ 2.06
PABPN1-201ENST00000216727 ZNF761Q86XN6 746 aaPredicted RBP27.89■■■□□ 2.06
PABPN1-201ENST00000216727 LHPPQ9H008 270 aa27.89■■■□□ 2.06
PABPN1-201ENST00000216727 AASSQ9UDR5 926 aa27.89■■■□□ 2.06
PABPN1-201ENST00000216727 TMCC3Q9ULS5 477 aa27.89■■■□□ 2.06
PABPN1-201ENST00000216727 NINQ8N4C6 2090 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 A0A1W2PR77 199 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 B4DGG1 531 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 DNAJB6O75190 326 aa27.89■■■□□ 2.05
PABPN1-201ENST00000216727 OXSR1O95747 527 aaPredicted RBP27.89■■■□□ 2.05
PABPN1-201ENST00000216727 PPP1CAP62136 330 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms