RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 DNAJB8Q8NHS0 232 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 BBS10Q8TAM1 723 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 GEMIN6Q8WXD5 167 aaKnown RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 OTULINQ96BN8 352 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ZG16BQ96DA0 208 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 MSANTD3Q96H12 275 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ZNF582Q96NG8 517 aaPredicted RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ATF6BQ99941 703 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 MND1Q9BWT6 205 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 RNF32Q9H0A6 362 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SAP130Q9H0E3 1048 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ISG20L2Q9H9L3 353 aaKnown RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SEC14L4Q9UDX3 406 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 AP3M1Q9Y2T2 418 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 PCYT1BQ9Y5K3 369 aaPredicted RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SNRNP200O75643 2136 aaKnown RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 A0A1W2PPK0 400 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 FAM25AB3EWG3 89 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 FAM25CB3EWG5 89 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 FAM25GB3EWG6 89 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ANHXE9PGG2 379 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 NPC1O15118 1278 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 TEX28O15482 410 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 NUPL2O15504 423 aaKnown RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 CKBP12277 381 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 OSMP13725 252 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ATP1B2P14415 290 aaPredicted RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ZNF30P17039 623 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 CELP19835 753 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 RPS5P46782 204 aaKnown RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SLC6A11P48066 632 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 STXBP1P61764 594 aaKnown RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SNTA1Q13424 505 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SLBPQ14493 270 aaKnown RBP eCLIP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 GINS1Q14691 196 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 HEPACAMQ14CZ8 416 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ZNF284Q2VY69 593 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 TRIQKQ629K1 86 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 RETSATQ6NUM9 610 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ANKRD54Q6NXT1 300 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 PODNL1Q6PEZ8 512 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 IQCHQ86VS3 1027 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ADGRF3Q8IZF5 1079 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SHISA5Q8N114 240 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ANKK1Q8NFD2 765 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 OR52N2Q8NGI0 321 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 POF1BQ8WVV4 589 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 HMGB4Q8WW32 186 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 UROC1Q96N76 676 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 WDFY2Q96P53 400 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 MS4A7Q9GZW8 240 aaPredicted RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 CCDC86Q9H6F5 360 aaKnown RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ZNF334Q9HCZ1 680 aaPredicted RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 THSD1Q9NS62 852 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SEMA3GQ9NS98 782 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 TDP1Q9NUW8 608 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SLCO1C1Q9NYB5 712 aa5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 CNOT2Q9NZN8 540 aaKnown RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 CXXC1Q9P0U4 656 aaPredicted RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 SIRT4Q9Y6E7 314 aaPredicted RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 ARID1BQ8NFD5 2236 aaPredicted RBP5.52□□□□□ -1.53
CEACAM1-201ENST00000161559 DENND4CQ5VZ89 1909 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 MTCL1Q9Y4B5 1905 aaKnown RBP5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 ANTXRLA6NF34 631 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 I3L521 148 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 LIMS3P0CW19 117 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 LIMS4P0CW20 117 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 MYL12AP19105 171 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 POLR2EP19388 210 aaKnown RBP5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 RRAS2P62070 204 aaPredicted RBP5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 TBPL1P62380 186 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 C19orf57Q0VDD7 668 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 TNK1Q13470 666 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 FGFBP1Q14512 234 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 SNAPC1Q16533 368 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 TRIM71Q2Q1W2 868 aaKnown RBP5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 LCN1P1Q5VSP4 162 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 ASTLQ6HA08 431 aaPredicted RBP5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 KIAA1161Q6NSJ0 714 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 CASP12Q6UXS9 341 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 RNF165Q6ZSG1 346 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 USP45Q70EL2 814 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 SLC24A5Q71RS6 500 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 TCTE3Q8IZS6 198 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 C19orf18Q8NEA5 215 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 CEP76Q8TAP6 659 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 C16orf78Q8WTQ4 265 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 PPCDCQ96CD2 204 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 PAWRQ96IZ0 340 aaKnown RBP5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 DHRS9Q9BPW9 319 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 KLF16Q9BXK1 252 aaPredicted RBP5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 B3GNT4Q9C0J1 378 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 REEP4Q9H6H4 257 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 ZFP64Q9NPA5 681 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 NUDT15Q9NV35 164 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 MRPL15Q9P015 296 aaKnown RBP5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 BTNL2Q9UIR0 455 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 ZNF222Q9UK12 451 aa5.51□□□□□ -1.53
CEACAM1-201ENST00000161559 FBXW2Q9UKT8 454 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms