RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 KCTD7Q96MP8 289 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 TREX2Q9BQ50 279 aaPredicted RBP13.27□□□□□ -0.28
USH1C-201ENST00000005226 SGPP1Q9BX95 441 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 B3GAT2Q9NPZ5 323 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 FBXW2Q9UKT8 454 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 GLOD5A6NK44 160 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 FRS3O43559 492 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 IL1AP01583 271 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 CPEP16870 476 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 IRS1P35568 1242 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 SLC9A3P48764 834 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 E2F2Q14209 437 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 DDI2Q5TDH0 399 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 CNIH2Q6PI25 160 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 LIPIQ6XZB0 460 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 KIF18BQ86Y91 864 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 KLHDC8AQ8IYD2 350 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 LRRC56Q8IYG6 542 aaPredicted RBP13.27□□□□□ -0.29
USH1C-201ENST00000005226 FAM181AQ8N9Y4 354 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 TIFAQ96CG3 184 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 TCEAL4Q96EI5 215 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 RNFT2Q96EX2 444 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 ZNF354BQ96LW1 612 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 TBC1D17Q9HA65 648 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 TRPV5Q9NQA5 729 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 CUEDC1Q9NWM3 386 aaPredicted RBP13.27□□□□□ -0.29
USH1C-201ENST00000005226 TESQ9UGI8 421 aaKnown RBP13.27□□□□□ -0.29
USH1C-201ENST00000005226 ALG5Q9Y673 324 aa13.27□□□□□ -0.29
USH1C-201ENST00000005226 SHISA3A0PJX4 238 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 TYRP14679 529 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 PSMB5P28074 263 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 HTR2BP41595 481 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 PNLIPRP1P54315 467 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 GAS1P54826 345 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 SLC7A9P82251 487 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 CCDC85BQ15834 202 aaPredicted RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 OCLNQ16625 522 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 OR6T1Q8NGN1 323 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 OR5AR1Q8NGP9 310 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 TMED9Q9BVK6 235 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 FNDC11Q9BVV2 318 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 MCOLN1Q9GZU1 580 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 SIRT3Q9NTG7 399 aaPredicted RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 TEX10Q9NXF1 929 aaPredicted RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 NDOR1Q9UHB4 597 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 IL20RAQ9UHF4 553 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 DIMT1Q9UNQ2 313 aaKnown RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 LOC102723532A0A0G2JNH3 316 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 C2orf92A0A1B0GVN3 265 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 CASKO14936 926 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 TGM5O43548 720 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 ALPPP05187 535 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 SRPRAP08240 638 aaKnown RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 SLC2A2P11168 524 aaPredicted RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 AVPR1BP47901 424 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 GPR19Q15760 415 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 PLET1Q6UQ28 207 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 FAM83HQ6ZRV2 1179 aaPredicted RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 TMC8Q8IU68 726 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 Q8N402 240 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 ANKRD53Q8N9V6 530 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 KLK6Q92876 244 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 SENP5Q96HI0 755 aaPredicted RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 MACROD1Q9BQ69 325 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 ZNF717Q9BY31 904 aaPredicted RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 A4GALTQ9NPC4 353 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 SF3B6Q9Y3B4 125 aaKnown RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 A0A1B0GVC2 190 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 A6NIN4 97 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 TNFRSF10AO00220 468 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 KPNA3O00505 521 aaPredicted RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 CCL16O15467 120 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 PDPK1O15530 556 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 EPPINO95925 133 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 SERPIND1P05546 499 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 NR2F1P10589 423 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 MYL12AP19105 171 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 RPL3P39023 403 aaKnown RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 CCT3P49368 545 aaKnown RBP13.26□□□□□ -0.29
USH1C-201ENST00000005226 CTBP2P56545 445 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 WNT4P56705 351 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 DCDC1P59894 354 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 ZNF628Q5EBL2 1059 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 FAM209AQ5JX71 171 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 SLC30A8Q8IWU4 369 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 FAM26EQ8N5C1 309 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 GDPD1Q8N9F7 314 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 FUZQ9BT04 418 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 OR51I1Q9H343 314 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 MAN2C1Q9NTJ4 1040 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 GIMAP4Q9NUV9 329 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 ACOXLQ9NUZ1 547 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 HCFC2Q9Y5Z7 792 aa13.26□□□□□ -0.29
USH1C-201ENST00000005226 TMPRSS11DO60235 418 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 POP7O75817 140 aaKnown RBP13.25□□□□□ -0.29
USH1C-201ENST00000005226 DDCP20711 480 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 BUD31P41223 144 aaPredicted RBP13.25□□□□□ -0.29
USH1C-201ENST00000005226 SREBF2Q12772 1141 aa13.25□□□□□ -0.29
USH1C-201ENST00000005226 IL18Q14116 193 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms