RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Prl8a8Q9DAS4 241 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Dapp1Q9QXT1 280 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 NcdnQ9Z0E0 729 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Srpk3Q9Z0G2 565 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Sdk2Q6V4S5 2176 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr1164A2AVT5 326 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm6337K7N6X9 211 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm8011K7N6Y5 207 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm3115L7N285 211 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 RbpjlO08674 515 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Csnk2a2O54833 350 aaKnown RBP8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gsta3P30115 221 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Cct8P42932 548 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 MocosQ14CH1 862 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Adrbk2Q3UYH7 688 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Vac14Q80WQ2 782 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Derl2Q8BNI4 239 aaKnown RBP8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Timmdc1Q8BUY5 285 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 BC024139Q8BVJ3 772 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr522Q8VGL1 312 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Hemk1Q921L7 340 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gins4Q99LZ3 223 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gadd45gip1Q9CR59 222 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Myg1Q9JK81 380 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 ArntlQ9WTL8 632 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ccl27Q9Z1X0 120 aa8.21□□□□□ -1.1
Trim39-201ENSMUST00000042717 Prob1A0A087WR45 1010 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm14399A2ARW8 610 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Tmed7D3YZZ5 224 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Tmem233D3Z1U7 110 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm19965J3QNY8 723 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm8926L7MUE8 181 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Slc6a11P31650 627 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Brf2Q3UAW9 420 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 MogQ61885 246 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr1133Q7TR44 313 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Serinc5Q8BHJ6 461 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Hs3st5Q8BSL4 346 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ip6k3Q8BWD2 396 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 1700020N01RikQ8CF20 87 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Armcx6Q8K3A6 301 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Spns1Q8R0G7 528 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Trim31Q8R0K2 507 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Tm6sf2Q8R1J1 378 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Mospd1Q8VEL0 213 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr1378Q8VGH0 315 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 MrgprhQ99MT8 321 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Nudt21Q9CQF3 227 aaKnown RBP8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Dcdc2cQ9D1B8 347 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Tex22Q9D9U4 189 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Stpg4Q9DAG5 247 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Htr3bQ9JHJ5 437 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Arpc3Q9JM76 178 aaKnown RBP8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Rhox2dW4VSN9 191 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Wnk2Q3UH66 2149 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm13723A0A1L1SUP2 315 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Zfp600A2A7V0 737 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Zfp300A2AE21 645 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Fndc7A2AED3 737 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Xlr5aA2BI45 236 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Pdia2D3Z6P0 527 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Slc28a1E9PXX9 648 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 A530032D15RikE9Q422 215 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 A630095N17RikJ3KMM7 116 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Fpr-s1O08790 351 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Aff2O55112 1272 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Galr3O88853 370 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Lire1P11260 357 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ccnb2P30276 398 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Pold1P52431 1105 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Csn1s2aQ02862 184 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr629Q0VBH3 314 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Mmp25Q3U435 615 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Cep295nlQ497N6 533 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Nxf3Q4ZGD9 553 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr325Q5NCD2 326 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 4930512M02RikQ5SQK8 218 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Sp9Q64HY3 484 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 AasdhQ80WC9 1100 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ppp1r3eQ8BRJ4 279 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Klhl31Q8BWA5 634 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Mettl7a1Q8C6B0 244 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Fbxl22Q8C7B6 236 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Atxn7l2Q8C8K6 696 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Panx3Q8CEG0 392 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 RtbdnQ8QZY4 247 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Cnot11Q9CWN7 505 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 9230112D13RikQ9D260 137 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Tex19.2Q9D5S1 317 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Erp27Q9D8U3 272 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 TrmuQ9DAT5 417 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Il23aQ9EQ14 196 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 DstnQ9R0P5 165 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Chek2Q9Z265 546 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Prune2Q52KR3 3084 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 SpegQ62407 3262 aa8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 HelzQ6DFV5 1964 aaKnown RBP8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Map1bP14873 2464 aaKnown RBP8.2□□□□□ -1.1
Trim39-201ENSMUST00000042717 Slc9a6A1L3P4 702 aa8.19□□□□□ -1.1
Trim39-201ENSMUST00000042717 Vmn2r18E9Q280 788 aa8.19□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms