RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 PGBD1Q96JS3 809 aa6.82□□□□□ -1.32
NECAP1-220ENST00000639841 SH3GL1Q99961 368 aa6.82□□□□□ -1.32
NECAP1-220ENST00000639841 CHRDL1Q9BU40 450 aa6.82□□□□□ -1.32
NECAP1-220ENST00000639841 KLC2Q9H0B6 622 aa6.82□□□□□ -1.32
NECAP1-220ENST00000639841 DNTTIP1Q9H147 329 aa6.82□□□□□ -1.32
NECAP1-220ENST00000639841 TMEM185BQ9H7F4 350 aa6.82□□□□□ -1.32
NECAP1-220ENST00000639841 SEBOXQ9HB31 216 aaPredicted RBP6.82□□□□□ -1.32
NECAP1-220ENST00000639841 IL20Q9NYY1 176 aa6.82□□□□□ -1.32
NECAP1-220ENST00000639841 TDRD15B5MCY1 1934 aaKnown RBP6.81□□□□□ -1.32
NECAP1-220ENST00000639841 EIF4E1BA6NMX2 242 aaKnown RBP6.81□□□□□ -1.32
NECAP1-220ENST00000639841 MS4A18H0YCH9 400 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF197O14709 1029 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 ARPC3O15145 178 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 ATP6AP2O75787 350 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 PAPSS2O95340 614 aaPredicted RBP6.81□□□□□ -1.32
NECAP1-220ENST00000639841 GOT2P00505 430 aaKnown RBP6.81□□□□□ -1.32
NECAP1-220ENST00000639841 KRT6AP02538 564 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 RETP07949 1114 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 ADRB1P08588 477 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 TPSB2P20231 275 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 PTGER4P35408 488 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 QARSP47897 775 aaKnown RBP6.81□□□□□ -1.32
NECAP1-220ENST00000639841 TPSAB1Q15661 275 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 FAM83EQ2M2I3 478 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 AGKQ53H12 422 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 PPM1LQ5SGD2 360 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 ZDHHC20Q5W0Z9 365 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 LRRC8BQ6P9F7 803 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 TRPM8Q7Z2W7 1104 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 TFAP2DQ7Z6R9 452 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 LHFPL4Q7Z7J7 247 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 CCDC65Q8IXS2 484 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 KRT222Q8N1A0 295 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 TMEM132CQ8N3T6 1108 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF565Q8N9K5 539 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 IRF7Q92985 503 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF479Q96JC4 524 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 TM6SF1Q9BZW5 370 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 FBXO44Q9H4M3 255 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF768Q9H5H4 540 aaKnown RBP6.81□□□□□ -1.32
NECAP1-220ENST00000639841 GEMIN7Q9H840 131 aaKnown RBP6.81□□□□□ -1.32
NECAP1-220ENST00000639841 RAB18Q9NP72 206 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 ADAM28Q9UKQ2 775 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 SH2B3Q9UQQ2 575 aa6.81□□□□□ -1.32
NECAP1-220ENST00000639841 TRAV26-1A0A087WT03 109 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 TRAV25A0A0B4J276 109 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 KLF18A0A0U1RQI7 1052 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 GOLGA8TH3BQL2 631 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 PSMD11O00231 422 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 CLIC1O00299 241 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 MSH4O15457 936 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 TRAPPC3O43617 180 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 NARSO43776 548 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 ACSL4O60488 711 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 TMCC1O94876 653 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 SMC2O95347 1197 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 GAS8O95995 478 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 RPL13P26373 211 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 PCSK6P29122 969 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 TRIM23P36406 574 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 FDFT1P37268 417 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 SEC61GP60059 68 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 RPS15P62841 145 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 CSTF1Q05048 431 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF177Q13360 481 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 HNRNPA1L2Q32P51 320 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 HSP90AA4PQ58FG1 418 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 FUT10Q6P4F1 479 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 SPATA6LQ8N4H0 392 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 ASCC1Q8N9N2 400 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 B3GALNT2Q8NCR0 500 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 DHX33Q9H6R0 707 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 PPP1R3EQ9H7J1 279 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 ANKRA2Q9H9E1 313 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 LRRC4Q9HBW1 653 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 MARCH5Q9NX47 278 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 CISD1Q9NZ45 108 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 CHMP5Q9NZZ3 219 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 GCNT4Q9P109 453 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 SEC14L3Q9UDX4 400 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 MYH15Q9Y2K3 1946 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 DOCK8Q8NF50 2099 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 IQCF5A8MTL0 148 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 PRR23D1E9PI22 279 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 ZNF701M0R085 212 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 MSI1O43347 362 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 BCAS1O75363 584 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 UPK3AO75631 287 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 RGS11O94810 467 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 SORBS2O94875 1100 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 BAG4O95429 457 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 PRR23D2P0DMB1 279 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 UMPSP11172 480 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 LIMS1P48059 325 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 TNFSF10P50591 281 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 COPB1P53618 953 aaKnown RBP6.8□□□□□ -1.32
NECAP1-220ENST00000639841 TPM4P67936 248 aa6.8□□□□□ -1.32
NECAP1-220ENST00000639841 OTUD4Q01804 1114 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms