RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 OMPP47874 163 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 FMO5P49326 533 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 VAV2P52735 878 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ZNF135P52742 658 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 EPHA5P54756 1037 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 AP1S2P56377 157 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 EEFSECP57772 596 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 MLF1P58340 268 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PSME3P61289 254 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 RPL15P61313 204 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 IRX4P78413 519 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ADARB1P78563 741 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 HSD11B2P80365 405 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CCZ1BP86790 482 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CCZ1P86791 482 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 MEF2AQ02078 507 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 PAX5Q02548 391 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 SLC3A1Q07837 685 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 SERTAD2Q14140 314 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 KEAP1Q14145 624 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 GK2Q14410 553 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 ITIH4Q14624 930 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 SMCO1Q147U7 214 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 GRM7Q14831 915 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CHI3L2Q15782 390 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 TATDN3Q17R31 274 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 RNF151Q2KHN1 245 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 KIF19Q2TAC6 998 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 COL28A1Q2UY09 1125 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ITPRIPL2Q3MIP1 535 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 POM121L1PQ3SYA9 428 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CMPK2Q5EBM0 449 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CXorf66Q5JRM2 361 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 LRRC73Q5JTD7 316 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CCNJQ5T5M9 372 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 DCAF12L2Q5VW00 463 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 DENND2CQ68D51 928 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 TXNDC8Q6A555 127 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 TBC1D3GQ6DHY5 549 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 TBC1D3CQ6IPX1 549 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 NIPAL3Q6P499 406 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 LRRC8BQ6P9F7 803 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 TMEM107Q6UX40 140 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ABHD15Q6UXT9 468 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 C4orf22Q6V702 233 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 PLA2G4DQ86XP0 818 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 TMEM126BQ8IUX1 230 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 TBC1D3Q8IZP1 549 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 GABRG1Q8N1C3 465 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 C11orf44Q8N8P7 122 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 C12orf29Q8N999 325 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 Q8NA96 180 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 KIAA0895Q8NCT3 520 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PAPD5Q8NDF8 572 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 OR2D3Q8NGH3 330 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 OR5M8Q8NGP6 311 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 OR4A16Q8NH70 328 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 OR10J5Q8NHC4 309 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 MBD3L2Q8NHZ7 208 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 M1APQ8TC57 530 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PHOSPHO1Q8TCT1 267 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 HM13Q8TCT9 377 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PROKR1Q8TCW9 393 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CHPT1Q8WUD6 406 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 UBTD2Q8WUN7 234 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 OVCA2Q8WZ82 227 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ST8SIA1Q92185 356 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 SMPDL3BQ92485 455 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 LPAR1Q92633 364 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 SLC38A4Q969I6 547 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PSMG2Q969U7 264 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 FUBP1Q96AE4 644 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 LENG9Q96B70 501 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ECHDC3Q96DC8 303 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 DGCR14Q96DF8 476 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 PTCD3Q96EY7 689 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 OTUB1Q96FW1 271 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 HIST1H2AHQ96KK5 128 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 SFXN2Q96NB2 322 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CMKLR1Q99788 373 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 HIST1H2AJQ99878 128 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 PRRT1Q99946 306 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 P2RY13Q9BPV8 354 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 MESP1Q9BRJ9 268 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 CENPKQ9BS16 269 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ATG101Q9BSB4 218 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 WRAP53Q9BUR4 548 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 C20orf24Q9BUV8 137 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ST6GALNAC5Q9BVH7 336 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 GTPBP2Q9BX10 602 aaKnown RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 PANK2Q9BZ23 570 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 DPEP3Q9H4B8 488 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 ASB7Q9H672 318 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 SMYD3Q9H7B4 428 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 MTHFD2LQ9H903 347 aaPredicted RBP2.82□□□□□ -1.96
VIM-210ENST00000637053 CD209Q9NNX6 404 aa2.82□□□□□ -1.96
VIM-210ENST00000637053 RAB18Q9NP72 206 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms