RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 FGF17O60258 216 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 COQ9O75208 318 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 ALOX12BO75342 701 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 CREG1O75629 220 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 NPPAP01160 153 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 STATHP02808 62 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 GBAP04062 536 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 PGRP06401 933 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 HEXBP07686 556 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 ZCCHC18P0CG32 403 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 ICAM2P13598 275 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 CPMP14384 443 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 NCF2P19878 526 aaPredicted RBP6.29□□□□□ -1.4
UPF3B-205ENST00000636792 GPX3P22352 226 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 TACR1P25103 407 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 EMP2P54851 167 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 RRADP55042 308 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 DIO3P55073 304 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 KCNK10P57789 538 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 FOLH1Q04609 750 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 C2orf80Q0P641 193 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 STX4Q12846 297 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 SLC13A2Q13183 592 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 STX5Q13190 355 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 PTGR1Q14914 329 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 EXT1Q16394 746 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 UGT8Q16880 541 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 MINDY4Q4G0A6 757 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 CPTPQ5TA50 214 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 BHLHB9Q6PI77 547 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 TMEM64Q6YI46 380 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 ALDH16A1Q8IZ83 802 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 TRIML2Q8N7C3 387 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 ENDOVQ8N8Q3 282 aaKnown RBP6.29□□□□□ -1.4
UPF3B-205ENST00000636792 MORN4Q8NDC4 146 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 OR5T3Q8NGG3 340 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 OR8K3Q8NH51 312 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 RP9Q8TA86 221 aaKnown RBP6.29□□□□□ -1.4
UPF3B-205ENST00000636792 OR5P2Q8WZ92 322 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 TTC9Q92623 222 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 KLHL29Q96CT2 875 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 PPP1R36Q96LQ0 422 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 FER1L6-AS2Q96M78 137 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 CATSPER2Q96P56 530 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 DGAT2Q96PD7 388 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 CCNL2Q96S94 520 aaPredicted RBP6.29□□□□□ -1.4
UPF3B-205ENST00000636792 CSF3RQ99062 836 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 SCN2AQ99250 2005 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 LPAR4Q99677 370 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 TUBB6Q9BUF5 446 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 DUSP26Q9BV47 211 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 FAM107BQ9H098 131 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 ACTL8Q9H568 366 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 SAR1AQ9NR31 198 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 PTGFRNQ9P2B2 879 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 BTNL2Q9UIR0 455 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 LEF1Q9UJU2 399 aaPredicted RBP6.29□□□□□ -1.4
UPF3B-205ENST00000636792 C3orf18Q9UK00 162 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 PCDHGB4Q9UN71 923 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 CFL2Q9Y281 166 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 PTRH2Q9Y3E5 179 aaKnown RBP6.29□□□□□ -1.4
UPF3B-205ENST00000636792 GMEB1Q9Y692 573 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 SPTBN4Q9H254 2564 aa6.29□□□□□ -1.4
UPF3B-205ENST00000636792 CFAP54Q96N23 3096 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 A0A087WV48 116 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 C15orf38-AP3S2A0A0A6YYH1 394 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 LOC101059948A0A1B0GTJ6 334 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 PRSS51A0A1B0GVH4 220 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 A0A1W2PP18 115 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 WASHC1A8K0Z3 465 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 PLOD2O00469 737 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 PEX12O00623 359 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 PLOD3O60568 738 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 HNRNPCL1O60812 293 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 SH3BGRLO75368 114 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 HPP00738 406 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 CAPNS1P04632 268 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 UMODP07911 640 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 KRT16P08779 473 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 PPIBP23284 216 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 S100A3P33764 101 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 EIF2S3P41091 472 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 TRPC1P48995 793 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ALDH9A1P49189 494 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ANXA11P50995 505 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 MNAT1P51948 309 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 POLR2JP52435 117 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 OLR1P78380 273 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 PRR5P85299 388 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 MAT1AQ00266 395 aaKnown RBP6.28□□□□□ -1.4
UPF3B-205ENST00000636792 MAP4K2Q12851 820 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 NSDHLQ15738 373 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 SYT16Q17RD7 645 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 FAM174BQ3ZCQ3 159 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 VWA2Q5GFL6 755 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 MFSD4BQ5TF39 518 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 MLIPQ5VWP3 458 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 TMEM198Q66K66 360 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 C18orf63Q68DL7 685 aa6.28□□□□□ -1.4
UPF3B-205ENST00000636792 ZCCHC12Q6PEW1 402 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms