RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 LRRC72A6NJI9 287 aa16.88■□□□□ 0.29
FARP1-242ENST00000627049 SCN2BO60939 215 aa16.88■□□□□ 0.29
FARP1-242ENST00000627049 PRKACAP17612 351 aa16.88■□□□□ 0.29
FARP1-242ENST00000627049 SFRP4Q6FHJ7 346 aaPredicted RBP16.88■□□□□ 0.29
FARP1-242ENST00000627049 GRHL2Q6ISB3 625 aa16.88■□□□□ 0.29
FARP1-242ENST00000627049 HAGHLQ6PII5 290 aaPredicted RBP16.88■□□□□ 0.29
FARP1-242ENST00000627049 UNC5DQ6UXZ4 953 aa16.88■□□□□ 0.29
FARP1-242ENST00000627049 SMIM14Q96QK8 99 aa16.88■□□□□ 0.29
FARP1-242ENST00000627049 THAP7Q9BT49 309 aaPredicted RBP16.88■□□□□ 0.29
FARP1-242ENST00000627049 MRPS33Q9Y291 106 aaKnown RBP16.88■□□□□ 0.29
FARP1-242ENST00000627049 CACNG2Q9Y698 323 aa16.88■□□□□ 0.29
FARP1-242ENST00000627049 K7ERQ8 282 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ZNF432O94892 652 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 RPP14O95059 124 aaKnown RBP16.87■□□□□ 0.29
FARP1-242ENST00000627049 NUDT7P0C024 238 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 PTNP21246 168 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ACVR1BP36896 505 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 CDKN2CP42773 168 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ZNF91Q05481 1191 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ANKRD34AQ69YU3 496 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ALKAL1Q6UXT8 129 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 BTLAQ7Z6A9 289 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 TMED4Q7Z7H5 227 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 HMGN2P46Q86SG4 172 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 PDZD9Q8IXQ8 264 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 TEX26Q8N6G2 289 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 GRHL3Q8TE85 626 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 C16orf78Q8WTQ4 265 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 NANSQ9NR45 359 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 RBFOX1Q9NWB1 397 aaKnown RBP16.87■□□□□ 0.29
FARP1-242ENST00000627049 TRAPPC2P0DI81 140 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 TRAPPC2BP0DI82 140 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 C8orf89P0DMQ9 161 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 FSHRP23945 695 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 CHMP24386 653 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 WDR5P61964 334 aaKnown RBP16.87■□□□□ 0.29
FARP1-242ENST00000627049 CTF1Q16619 201 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 C3orf58Q8NDZ4 430 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 OR7G3Q8NG95 312 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 THAP6Q8TBB0 222 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 RIPOR3Q96MK2 946 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 NIPAL2Q9H841 368 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 NUBP2Q9Y5Y2 271 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 M0QZQ0 153 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 PLATP00750 562 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ITGA3P26006 1051 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 TBPL1P62380 186 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 RACK1P63244 317 aaKnown RBP16.87■□□□□ 0.29
FARP1-242ENST00000627049 PIN1Q13526 163 aaPredicted RBP16.87■□□□□ 0.29
FARP1-242ENST00000627049 SLC25A24Q6NUK1 477 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ZCCHC10Q8TBK6 192 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ZNF566Q969W8 418 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 NUS1Q96E22 293 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 TRIM2Q9C040 744 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 LYARQ9NX58 379 aaKnown RBP16.87■□□□□ 0.29
FARP1-242ENST00000627049 SLC39A1Q9NY26 324 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 WDR45Q9Y484 360 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 WASHC1A8K0Z3 465 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 B8ZZF3 427 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 PRODHO43272 600 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 STC2O76061 302 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ADH1CP00326 375 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 MARCH8Q5T0T0 291 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 PM20D2Q8IYS1 436 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 SDR16C5Q8N3Y7 309 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 BRI3BPQ8WY22 251 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 ARHGAP39Q9C0H5 1083 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 HOXD1Q9GZZ0 328 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 C11orf54Q9H0W9 315 aaPredicted RBP16.87■□□□□ 0.29
FARP1-242ENST00000627049 SCN7AQ01118 1682 aa16.87■□□□□ 0.29
FARP1-242ENST00000627049 METTL21EPA6NDL7 271 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 MCIDASD6RGH6 385 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 CACNB4O00305 520 aaPredicted RBP16.86■□□□□ 0.29
FARP1-242ENST00000627049 KCNK5O95279 499 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 SCG5P05408 212 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 MLLT3P42568 568 aaPredicted RBP16.86■□□□□ 0.29
FARP1-242ENST00000627049 EIF5AP63241 154 aaKnown RBP16.86■□□□□ 0.29
FARP1-242ENST00000627049 KIAA0319Q5VV43 1072 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 KXD1Q9BQD3 176 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 TTTY10Q9BZA0 68 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.86■□□□□ 0.293e-6■□□□□ 11.3
FARP1-242ENST00000627049 GLOD5A6NK44 160 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 ALPPL2P10696 532 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 ITPKBP27987 946 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 CAP1Q01518 475 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 ESCO2Q56NI9 601 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 ZNF627Q7L945 461 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 UBE2Q1Q7Z7E8 422 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 OR52E4Q8NGH9 312 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 FANK1Q8TC84 345 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 OVCA2Q8WZ82 227 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 SLC35B4Q969S0 331 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 ECHDC3Q96DC8 303 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 ZNF354BQ96LW1 612 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 RBCK1Q9BYM8 510 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 BRF2Q9HAW0 419 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.86■□□□□ 0.29
FARP1-242ENST00000627049 TMEM5Q9Y2B1 443 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 PPM1AP35813 382 aa16.86■□□□□ 0.29
FARP1-242ENST00000627049 EFR3AQ14156 821 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms