RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 HSPBAP1Q96EW2 488 aa13.28□□□□□ -0.28
TUBB3-215ENST00000625617 ZNF717Q9BY31 904 aaPredicted RBP13.28□□□□□ -0.28
TUBB3-215ENST00000625617 LIME1Q9H400 295 aa13.28□□□□□ -0.28
TUBB3-215ENST00000625617 FOXD3Q9UJU5 478 aaPredicted RBP13.28□□□□□ -0.28
TUBB3-215ENST00000625617 C2orf92A0A1B0GVN3 265 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 A0A1W2PR48 441 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 ANKRD33BA6NCL7 494 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 FAM187AA6NFU0 413 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 TMPRSS11DO60235 418 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 EEDO75530 441 aaKnown RBP13.27□□□□□ -0.29
TUBB3-215ENST00000625617 TRAPPC6AO75865 159 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 FAM155BO75949 473 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 EPPINO95925 133 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 CLPSP04118 112 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 FAM58BPP0C7Q3 252 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 GFAPP14136 432 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 TACR1P25103 407 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 PTX3P26022 381 aaPredicted RBP13.27□□□□□ -0.29
TUBB3-215ENST00000625617 SSTR4P31391 388 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 STX2P32856 288 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 GALNSP34059 522 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 DGKQP52824 942 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 WNT3P56703 355 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 FBXW4P57775 412 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 GPX6P59796 221 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 SETDB1Q15047 1291 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 LIPJQ5W064 366 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 FBXW10Q5XX13 1052 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 HLA-DQA1Q5Y7H0 255 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 OR52E8Q6IFG1 317 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 MRM1Q6IN84 353 aaKnown RBP13.27□□□□□ -0.29
TUBB3-215ENST00000625617 TMEM64Q6YI46 380 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 NUDT13Q86X67 352 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 CDC20BQ86Y33 519 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 GALNT12Q8IXK2 581 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 ZNF441Q8N8Z8 693 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 RILPQ96NA2 401 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 ALPK1Q96QP1 1244 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 ERP44Q9BS26 406 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 DDX31Q9H8H2 851 aaKnown RBP13.27□□□□□ -0.29
TUBB3-215ENST00000625617 RNF14Q9UBS8 474 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 ZNF629Q9UEG4 869 aaPredicted RBP13.27□□□□□ -0.29
TUBB3-215ENST00000625617 CBLCQ9ULV8 474 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 ASB4Q9Y574 426 aa13.27□□□□□ -0.29
TUBB3-215ENST00000625617 KDM4EB2RXH2 506 aaPredicted RBP13.26□□□□□ -0.29
TUBB3-215ENST00000625617 H0YIV9 168 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 UGDHO60701 494 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 SNX4O95219 450 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 IL2RAP01589 272 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 SLC35E2P0CK97 266 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 MTHFD2P13995 350 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 CEACAM8P31997 349 aaPredicted RBP13.26□□□□□ -0.29
TUBB3-215ENST00000625617 BSGP35613 385 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 TIMP3P35625 211 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 CDK9P50750 372 aaKnown RBP13.26□□□□□ -0.29
TUBB3-215ENST00000625617 NRG3P56975 720 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 RPP38P78345 283 aaKnown RBP13.26□□□□□ -0.29
TUBB3-215ENST00000625617 FOXD4Q12950 439 aaPredicted RBP13.26□□□□□ -0.29
TUBB3-215ENST00000625617 NAB1Q13506 487 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 CUL3Q13618 768 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 SF3B4Q15427 424 aaKnown RBP eCLIP13.26□□□□□ -0.297e-7■■■■□ 24
TUBB3-215ENST00000625617 CPSF6Q16630 551 aaKnown RBP eCLIP13.26□□□□□ -0.29
TUBB3-215ENST00000625617 PFKFB4Q16877 469 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 C6orf163Q5TEZ5 329 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 BICRALQ6AI39 1079 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 PAMR1Q6UXH9 720 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 CCDC91Q7Z6B0 441 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 PACS2Q86VP3 889 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 SPPL2AQ8TCT8 520 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 KCTD4Q8WVF5 259 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 TP53INP1Q96A56 240 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 NXNL1Q96CM4 212 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 SECISBP2Q96T21 854 aaKnown RBP13.26□□□□□ -0.29
TUBB3-215ENST00000625617 TIMP4Q99727 224 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 PRDM14Q9GZV8 571 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 CXorf21Q9HAI6 301 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 GRHL1Q9NZI5 618 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 CAMK2AQ9UQM7 478 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 C15orf41Q9Y2V0 281 aa13.26□□□□□ -0.29
TUBB3-215ENST00000625617 A0A087X1B8 175 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 CCDC189A1A4V9 331 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 TUBAL3A6NHL2 446 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 WASHC1A8K0Z3 465 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 EEF1E1-BLOC1S5C9J1V9 151 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 EEF1E1O43324 174 aaKnown RBP13.25□□□□□ -0.29
TUBB3-215ENST00000625617 RAD51CO43502 376 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 HPNP05981 417 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 ARL1P40616 181 aaPredicted RBP13.25□□□□□ -0.29
TUBB3-215ENST00000625617 PIK3CGP48736 1102 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 ZNF136P52737 540 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 ALDH18A1P54886 795 aaKnown RBP13.25□□□□□ -0.29
TUBB3-215ENST00000625617 IRF9Q00978 393 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 TOMM20Q15388 145 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 FAM83EQ2M2I3 478 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 NSUN5P2Q63ZY6 315 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 CCDC25Q86WR0 208 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 KIF18BQ86Y91 864 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 CENPLQ8N0S6 344 aaPredicted RBP13.25□□□□□ -0.29
TUBB3-215ENST00000625617 RHEBL1Q8TAI7 183 aa13.25□□□□□ -0.29
TUBB3-215ENST00000625617 FBF1Q8TES7 1133 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms