RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 P2RX2Q9UBL9 471 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 ENOPH1Q9UHY7 261 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 KIF26AQ9ULI4 1882 aaPredicted RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 NME6O75414 186 aaPredicted RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 SERPINB7O75635 380 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 ADH1BP00325 375 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 RPLP0P05388 317 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 OSMP13725 252 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 PKLRP30613 574 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 RAB8AP61006 207 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 TARDBPQ13148 414 aaKnown RBP eCLIP11.31□□□□□ -0.6
TP53-227ENST00000622645 ENPP2Q13822 863 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 ZNF404Q494X3 552 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 PARM1Q6UWI2 310 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 BCDIN3DQ7Z5W3 292 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 TRIM73Q86UV7 250 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 TBC1D19Q8N5T2 526 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 ACOT4Q8N9L9 421 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 OR2L8Q8NGY9 312 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 FGF14Q92915 247 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 BBS4Q96RK4 519 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 C1QTNF2Q9BXJ5 285 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 MROQ9BYG7 248 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 SLC17A9Q9BYT1 436 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 ANKRA2Q9H9E1 313 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 CLN6Q9NWW5 311 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 SCHIP1Q9P0W5 487 aaPredicted RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 FBXW2Q9UKT8 454 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 IFT52Q9Y366 437 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 MYO9BQ13459 2157 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 TLR4O00206 839 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 KPNA4O00629 521 aaPredicted RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 SLC31A1O15431 190 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 CNOT3O75175 753 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 DRD2P14416 443 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 DDX5P17844 614 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 PBX2P40425 430 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 ERVK-21P61565 698 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 RPS21P63220 83 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 DNASE1L3Q13609 305 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 LASP1Q14847 261 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 MLC1Q15049 377 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 C18orf63Q68DL7 685 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 PGBD2Q6P3X8 592 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 UBE2Q1Q7Z7E8 422 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 CNRIP1Q96F85 164 aaPredicted RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 TIMM29Q9BSF4 260 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 C6orf62Q9GZU0 229 aaPredicted RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 QRSL1Q9H0R6 528 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 POLR2J3Q9H1A7 115 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 PRDM7Q9NQW5 492 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 TRNAU1APQ9NX07 287 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 DNAJC27Q9NZQ0 273 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 A4GNTQ9UNA3 340 aa11.31□□□□□ -0.6
TP53-227ENST00000622645 YBX2Q9Y2T7 364 aaKnown RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 GPC6Q9Y625 555 aaPredicted RBP11.31□□□□□ -0.6
TP53-227ENST00000622645 SH3D21A4FU49 640 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 DSCR3O14972 297 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 EPPINO95925 133 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 HMGN2P05204 90 aaKnown RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 PORP16435 677 aaPredicted RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 TNNI3P19429 210 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 HIST1H1TP22492 207 aaPredicted RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 PEBP1P30086 187 aaKnown RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 IGFALSP35858 605 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 UGT2B10P36537 528 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 TRA2BP62995 288 aaKnown RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 TUBA1BP68363 451 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 ILKQ13418 452 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 ZIC1Q15915 447 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 NIPAL1Q6NVV3 410 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 ABHD17CQ6PCB6 329 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 TUBA1AQ71U36 451 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 CLIP4Q8N3C7 705 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 OR2L3Q8NG85 312 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 WDR36Q8NI36 951 aaKnown RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 SUN3Q8TAQ9 357 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 C16orf58Q96GQ5 468 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 ZNF764Q96H86 408 aaPredicted RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 MYADMQ96S97 322 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 MGLLQ99685 303 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 TRMT61BQ9BVS5 477 aaKnown RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 FAIM2Q9BWQ8 316 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 CDCA4Q9BXL8 241 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 POLE4Q9NR33 117 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 SLC17A4Q9Y2C5 497 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 ASB4Q9Y574 426 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 F5P12259 2224 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 EFCAB10A6NFE3 127 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 METTL15A6NJ78 407 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 FAAHO00519 579 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 PRICKLE3O43900 615 aaPredicted RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 MPZL2O60487 215 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 ATP6V1G1O75348 118 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 CHRM4P08173 479 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 CERS1P27544 350 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 NTSP30990 170 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 GSTM5P46439 218 aa11.3□□□□□ -0.6
TP53-227ENST00000622645 RPS3AP61247 264 aaKnown RBP11.3□□□□□ -0.6
TP53-227ENST00000622645 FUT5Q11128 374 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms