RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SPRED3Q2MJR0 410 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 PLEKHG7Q6ZR37 379 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 OR52P1PQ8NH57 321 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 DOK4Q8TEW6 326 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 LRRC15Q8TF66 581 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 MYLIPQ8WY64 445 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ERMAPQ96PL5 475 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 KLF16Q9BXK1 252 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ALOXE3Q9BYJ1 711 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 COMMD3Q9UBI1 195 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 GPR160Q9UJ42 338 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 SLC9B1P1A6NJY1 282 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 RTCAO00442 366 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 AZGP1P25311 298 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 SLC6A4P31645 630 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 THBS2P35442 1172 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 RNF144AP50876 292 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ERVFC1P60507 584 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF33BQ06732 778 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 MELKQ14680 651 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 MANEALQ5VSG8 457 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 GALNT10Q86SR1 603 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 SLC44A3Q8N4M1 653 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 MAFAQ8NHW3 353 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 CCDC107Q8WV48 283 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 PYURFQ96I23 114 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 SERINC2Q96SA4 455 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 PHF7Q9BWX1 381 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 OR51I1Q9H343 314 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 VNN3Q9NY84 501 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 C14orf166Q9Y224 244 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 NRAPQ86VF7 1730 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 TEX13DA0A0J9YY54 714 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 A6NHS1 94 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 CREG1O75629 220 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ICAM2P13598 275 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 CHRNB4P30926 498 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 TAS2R43P59537 309 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 LSAMPQ13449 338 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 HSF5Q4G112 596 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 TANGO2Q6ICL3 276 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 USP43Q70EL4 1123 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 DPPA4Q7L190 304 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ABHD12BQ7Z5M8 362 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ARHGAP12Q8IWW6 846 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF615Q8N8J6 731 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 CNEP1R1Q8N9A8 125 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF420Q8TAQ5 688 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 KCTD7Q96MP8 289 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 PMF1-BGLAPU3KQ54 211 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 LOC102723532A0A0G2JNH3 316 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 C17orf105B2RV13 164 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 PDLIM1O00151 329 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 TNFSF4P23510 183 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 HOXD13P35453 343 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 FADDQ13158 208 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 IRF4Q15306 451 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 LRIT3Q3SXY7 679 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 NKAPLQ5M9Q1 402 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 RPL13AP3Q6NVV1 102 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 SHISA6Q6ZSJ9 500 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 MAMDC2Q7Z304 686 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 MARCH9Q86YJ5 346 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 UEVLDQ8IX04 471 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 TEX19Q8NA77 164 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 SGTBQ96EQ0 304 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 PITX2Q99697 317 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 CCDC106Q9BWC9 280 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 LIN28AQ9H9Z2 209 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 PELI2Q9HAT8 420 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 ZBTB26Q9HCK0 441 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 NANSQ9NR45 359 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 HSFX1Q9UBD0 423 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 MGAT4BQ9UQ53 548 aa9.34□□□□□ -0.91
CLTCL1-211ENST00000621271 PRSS38A1L453 326 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 J3QRK9 145 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CCRL2O00421 344 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 FASLGP48023 281 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 MFSD13AQ14CX5 517 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 UGT3A2Q3SY77 523 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SCGB2B2Q4G0G5 96 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 ERMP1Q7Z2K6 904 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SLC15A3Q8IY34 581 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 MARVELD2Q8N4S9 558 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 ISG20Q96AZ6 181 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 FBXL8Q96CD0 374 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 STRA6Q9BX79 667 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 TXLNGYQ9BZA5 131 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SLC5A7Q9GZV3 580 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 MED28Q9H204 178 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 DYNLRB1Q9NP97 96 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CPNE7Q9UBL6 633 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 RPH3AQ9Y2J0 694 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 TMEM14AQ9Y6G1 99 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 PROM1O43490 865 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 ACTL6BO94805 426 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 SOX14O95416 240 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 FPR1P21462 350 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 CDK3Q00526 305 aa9.33□□□□□ -0.92
CLTCL1-211ENST00000621271 PUDPQ08623 228 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms